C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidic acid phosphatase type 2 domain containing 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133117 Ppapdc1b-004 ENSMUSG00000031570 10090 + 8:25720064-25724887 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000133117
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000133117 7.836±1.00 6.488±0.74 9.871±5.22 5.321±0.00 4.671±1.15 15.333±4.06 1.930±0.46 2.480±0.58 6.085±2.81 5.246±1.02 0.639±0.21 7.708±3.14 6.124±3.10 1.044±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H7 CIL_0008H7_0002 VISTA 8:25139932-25741457
CIL_0008SM CIL_0008SM_0002 VISTA 8:25140188-25742103
CIL_0008NR CIL_0008NR_0002 VISTA 8:25243011-25845762

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000419686 PPAPDC1B-003 protein_coding Homo_sapiens 0 473
ENST00000422581 PPAPDC1B-002 protein_coding Homo_sapiens 0 460
ENST00000424479 PPAPDC1B-001 protein_coding Homo_sapiens 0 460
ENST00000524616 PPAPDC1B-007 protein_coding Homo_sapiens 0 390
ENST00000527793 PPAPDC1B-014 processed_transcript Homo_sapiens 0 257
ENST00000528814 PPAPDC1B-004 retained_intron Homo_sapiens 0 259
ENST00000529359 PPAPDC1B-005 protein_coding Homo_sapiens 0 431
ENST00000530193 PPAPDC1B-013 processed_transcript Homo_sapiens 0 263
ENST00000530432 PPAPDC1B-012 retained_intron Homo_sapiens 0 396
ENST00000531109 PPAPDC1B-016 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000531483 PPAPDC1B-009 processed_transcript Homo_sapiens 5.00264e-43 178
ENST00000531823 PPAPDC1B-015 protein_coding Homo_sapiens 0 390
ENST00000534339 PPAPDC1B-006 protein_coding Homo_sapiens 0 462

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