C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil serine rich 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133478 Ccser1-004 ENSMUSG00000039578 10090 + 6:61180537-61312977 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLiverLungOvaryENSMUST00000133478
Transcript ID Adipose Colon Liver Lung Ovary
ENSMUST00000133478 0.128±0.00 1.391±0.00 0.012±0.00 0.693±0.00 0.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083N CIL_00083N_0002 VISTA 6:60741566-61344404
CIL_0000KN CIL_0000KN_0002 CGP 6:60924976-62382865
CIL_0001RV CIL_0001RV_0003 CGP 6:61180324-64668282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000432775 CCSER1-002 protein_coding Homo_sapiens 0 1057
ENST00000505073 CCSER1-003 nonsense_mediated_decay Homo_sapiens 0 1061
ENST00000509176 CCSER1-001 protein_coding Homo_sapiens 0 1061

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