C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | synaptophysin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000134355  |
Syp-006 |
ENSMUSG00000031144 |
10090 | + |
X:7643909-7645033  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003V1 | CIL_0003V1_0002 | CGP | X:7607083-7653256 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000263233
|
SYP-001 | protein_coding | Homo_sapiens | 0 | 302 |
|
ENST00000376303
|
SYP-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 298 |
|
ENST00000466635
|
SYP-008 | nonsense_mediated_decay | Homo_sapiens | 0.0000002 | 60 |
|
ENST00000469389
|
SYP-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 237 |
|
ENST00000479808
|
SYP-004 | protein_coding | Homo_sapiens | 0 | 302 |
