C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor co-repressor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134404 Ncor2-005 ENSMUSG00000029478 10090 - 5:125030800-125058400 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PN CIL_0004PN_0002 CGP 5:125003447-125179219
CIL_000399 CIL_000399_0002 CGP 5:125017153-125341094

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IDA histone deacetylase complex
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001701 IMP in utero embryonic development
GO:0003007 IGI heart morphogenesis
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0003714 IMP transcription corepressor activity
GO:0005515 IPI protein binding
GO:0016604 IDA nuclear body
GO:0021537 IMP telencephalon development
GO:0021846 IMP cell proliferation in forebrain
GO:0030900 IMP forebrain development
GO:0042593 IMP glucose homeostasis
GO:0043565 IDA sequence-specific DNA binding
GO:0045599 IMP negative regulation of fat cell differentiation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0050872 IMP white fat cell differentiation
GO:0060509 IGI Type I pneumocyte differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356219 NCOR2-201 protein_coding Homo_sapiens 0 1783
ENST00000404121 NCOR2-202 protein_coding Homo_sapiens 0 1783
ENST00000404621 NCOR2-002 protein_coding Homo_sapiens 0 1783
ENST00000405201 NCOR2-005 protein_coding Homo_sapiens 0 1677
ENST00000429285 NCOR2-001 protein_coding Homo_sapiens 0 1783
ENST00000448614 NCOR2-009 protein_coding Homo_sapiens 0 274
ENST00000458234 NCOR2-003 protein_coding Homo_sapiens 0 1325

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