C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor corepressor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404621 NCOR2-002 ENSG00000196498 9606 - 12:124324415-124535603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000404621
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000404621 17.490±0.00 10.683±0.00 3.925±3.32 10.206±0.00 13.683±0.00 1.524±0.54 3.812±2.85 17.926±0.00 23.835±22.63 4.116±0.15 4.621±3.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000399 CIL_000399_0001 CGP 12:124324415-124882668

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111402 Ncor2-201 protein_coding Mus_musculus 0 4047
ENSMUST00000111393 Ncor2-001 protein_coding Mus_musculus 0 4047
ENSMUST00000125053 Ncor2-007 protein_coding Mus_musculus 0 3949
ENSMUST00000086083 Ncor2-004 protein_coding Mus_musculus 0 3360
ENSMUST00000111394 Ncor2-008 protein_coding Mus_musculus 0 3319
ENSMUST00000055256 Ncor2-003 protein_coding Mus_musculus 0 3319
ENSMUST00000111398 Ncor2-002 protein_coding Mus_musculus 0 3319
ENSMUST00000134404 Ncor2-005 protein_coding Mus_musculus 0 1783
ENSDART00000051139 ncor2-201 protein_coding Danio_rerio 0 928
ENSMUST00000138890 Ncor2-012 protein_coding Mus_musculus 0 577
ENSDART00000140618 ncor2-002 protein_coding Danio_rerio 0 392
ENSDART00000001092 ncor2-001 protein_coding Danio_rerio 0 392
ENSMUST00000149968 Ncor2-006 processed_transcript Mus_musculus 0 291
ENSMUST00000134819 Ncor2-009 protein_coding Mus_musculus 9e-37 161

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