C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor corepressor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404121 NCOR2-202 ENSG00000196498 9606 - 12:124324416-124422554 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLungPlacentaTestisENST00000404121
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Lung Placenta Testis
ENST00000404121 9.507±0.00 5.847±0.00 0.705±0.00 4.561±0.00 10.422±0.00 7.874±0.00 0.565±0.00 5.714±0.78 6.405±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000399 CIL_000399_0001 CGP 12:124324415-124882668

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111402 Ncor2-201 protein_coding Mus_musculus 0 5029
ENSMUST00000111393 Ncor2-001 protein_coding Mus_musculus 0 5029
ENSMUST00000125053 Ncor2-007 protein_coding Mus_musculus 0 4929
ENSMUST00000086083 Ncor2-004 protein_coding Mus_musculus 0 4342
ENSMUST00000111398 Ncor2-002 protein_coding Mus_musculus 0 4300
ENSMUST00000111394 Ncor2-008 protein_coding Mus_musculus 0 4061
ENSMUST00000055256 Ncor2-003 protein_coding Mus_musculus 0 4061
ENSMUST00000134404 Ncor2-005 protein_coding Mus_musculus 0 1783
ENSMUST00000138890 Ncor2-012 protein_coding Mus_musculus 0 577
ENSMUST00000149968 Ncor2-006 processed_transcript Mus_musculus 0 291
ENSDART00000051139 ncor2-201 protein_coding Danio_rerio 0 219
ENSDART00000140618 ncor2-002 protein_coding Danio_rerio 0 219
ENSDART00000001092 ncor2-001 protein_coding Danio_rerio 0 219
ENSMUST00000134819 Ncor2-009 protein_coding Mus_musculus 7e-37 161

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