C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000399_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196498-ENSG00000073060 CGP 9606 12:124324415-124882668
GeneTranscriptPositionBiotype
ENSG00000073060 (SCARB1)
scavenger receptor class B, member 1 		ENST00000261693 (SCARB1-004) 124777633-124863847 protein_coding
ENST00000339570 (SCARB1-001) 124776856-124863917 protein_coding
ENST00000415380 (SCARB1-006) 124777633-124863846 protein_coding
ENST00000535005 (SCARB1-003) 124782683-124880461 processed_transcript
ENST00000538291 (SCARB1-005) 124778278-124863863 retained_intron
ENST00000539320 (SCARB1-011) 124814973-124863896 processed_transcript
ENST00000541661 (SCARB1-013) 124814964-124882668 processed_transcript
ENST00000544327 (SCARB1-009) 124785820-124817707 protein_coding
ENST00000545305 (SCARB1-010) 124777873-124786493 processed_transcript
ENST00000545493 (SCARB1-012) 124814961-124863863 protein_coding
ENST00000546215 (SCARB1-007) 124778499-124863783 protein_coding
ENSG00000196498 (NCOR2)
nuclear receptor corepressor 2 		ENST00000356219 (NCOR2-201) 124324416-124422554 protein_coding
ENST00000404121 (NCOR2-202) 124324416-124422554 protein_coding
ENST00000404621 (NCOR2-002) 124324415-124535603 protein_coding
ENST00000405201 (NCOR2-005) 124324415-124495252 protein_coding
ENST00000413172 (NCOR2-018) 124325420-124327585 protein_coding
ENST00000418829 (NCOR2-017) 124325380-124332345 protein_coding
ENST00000420698 (NCOR2-004) 124419959-124518294 protein_coding
ENST00000429285 (NCOR2-001) 124324598-124535603 protein_coding
ENST00000440187 (NCOR2-013) 124337104-124341863 protein_coding
ENST00000440337 (NCOR2-015) 124328532-124333256 protein_coding
ENST00000443451 (NCOR2-022) 124325386-124334646 retained_intron
ENST00000448008 (NCOR2-019) 124430641-124483769 protein_coding
ENST00000448614 (NCOR2-009) 124372460-124388824 protein_coding
ENST00000453428 (NCOR2-012) 124340007-124342055 protein_coding
ENST00000458234 (NCOR2-003) 124346593-124567464 protein_coding
ENST00000461081 (NCOR2-006) 124331475-124336392 retained_intron
ENST00000464377 (NCOR2-016) 124326123-124327659 retained_intron
ENST00000473999 (NCOR2-011) 124347402-124348940 retained_intron
ENST00000474079 (NCOR2-014) 124334344-124335181 retained_intron
ENST00000493859 (NCOR2-010) 124355059-124356685 retained_intron
ENST00000494460 (NCOR2-007) 124429395-124430641 retained_intron
ENST00000536195 (NCOR2-020) 124354837-124356850 retained_intron
ENST00000542565 (NCOR2-008) 124486374-124567589 retained_intron
ENST00000542927 (NCOR2-024) 124430610-124483774 protein_coding
ENSG00000214650 (RP11-83B20.1)
 ENST00000543970 (RP11-83B20.1-001) 124513222-124514813 lincRNA
ENSG00000255965 (RP11-408I18.9)
 ENST00000545095 (RP11-408I18.9-001) 124383381-124383510 processed_pseudogene
ENSG00000278973 (RP11-83B20.9)
 ENST00000623062 (RP11-83B20.9-001) 124622290-124623069 TEC
ENSG00000279071 (RP11-83B20.3)
 ENST00000625118 (RP11-83B20.3-001) 124537844-124539677 TEC
ENSG00000279121 (RP11-83B20.5)
 ENST00000624854 (RP11-83B20.5-001) 124555905-124556432 TEC
ENSG00000279334 (RP11-83B20.6)
 ENST00000624271 (RP11-83B20.6-001) 124561869-124562283 TEC
ENSG00000279527 (RP11-83B20.2)
 ENST00000623659 (RP11-83B20.2-001) 124529722-124530228 TEC
ENSG00000280097 (RP11-83B20.7)
 ENST00000624126 (RP11-83B20.7-001) 124593181-124593691 TEC
ENSG00000280354 (RP11-83B20.4)
 ENST00000624885 (RP11-83B20.4-001) 124542503-124542873 TEC
ENSG00000280444 (RP11-83B20.8)
 ENST00000624789 (RP11-83B20.8-001) 124623391-124623987 TEC

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_000399_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029478-ENSMUSG00000037936 CGP 10090 5:125017153-125341094
GeneTranscriptPositionBiotype
ENSMUSG00000037936 (Scarb1)
scavenger receptor class B, member 1 		ENSMUST00000086075 (Scarb1-001) 125277087-125341094 protein_coding
ENSMUST00000111390 (Scarb1-002) 125277089-125341071 protein_coding
ENSMUST00000123338 (Scarb1-009) 125297319-125304542 processed_transcript
ENSMUST00000124582 (Scarb1-010) 125277787-125284159 processed_transcript
ENSMUST00000127148 (Scarb1-005) 125277566-125294109 protein_coding
ENSMUST00000133624 (Scarb1-008) 125300360-125316632 processed_transcript
ENSMUST00000135736 (Scarb1-004) 125282950-125286677 retained_intron
ENSMUST00000137783 (Scarb1-006) 125304179-125340008 protein_coding
ENSMUST00000148373 (Scarb1-003) 125283355-125341019 retained_intron
ENSMUST00000156532 (Scarb1-007) 125304249-125326267 processed_transcript

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000399_0001ENSG00000073060ENST00000261693ENST00000339570ENST00000415380ENST00000535005ENST00000538291ENST00000539320ENST00000541661ENST00000544327ENST00000545305ENST00000545493ENST00000546215ENSG00000196498ENST00000356219ENST00000404121ENST00000404621ENST00000405201ENST00000413172ENST00000418829ENST00000420698ENST00000429285ENST00000440187ENST00000440337ENST00000443451ENST00000448008ENST00000448614ENST00000453428ENST00000458234ENST00000461081ENST00000464377ENST00000473999ENST00000474079ENST00000493859ENST00000494460ENST00000536195ENST00000542565ENST00000542927ENSG00000214650ENST00000543970ENSG00000255965ENST00000545095ENSG00000278973ENST00000623062ENSG00000279071ENST00000625118ENSG00000279121ENST00000624854ENSG00000279334ENST00000624271ENSG00000279527ENST00000623659ENSG00000280097ENST00000624126ENSG00000280354ENST00000624885ENSG00000280444ENST00000624789CIL_000399_0002ENSMUSG00000037936ENSMUST00000086075ENSMUST00000111390ENSMUST00000123338ENSMUST00000124582ENSMUST00000127148ENSMUST00000133624ENSMUST00000135736ENSMUST00000137783ENSMUST00000148373ENSMUST00000156532
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000399_0001ENSG00000073060ENST00000261693ENST00000339570ENST00000415380ENST00000535005ENST00000538291ENST00000544327ENST00000545305ENST00000545493ENST00000546215ENSG00000196498ENST00000356219ENST00000404121ENST00000404621ENST00000405201ENST00000420698ENST00000429285ENST00000443451ENST00000458234ENSG00000214650ENST00000543970ENSG00000255965ENST00000545095ENSG00000278973ENST00000623062ENSG00000279071ENST00000625118ENSG00000279121ENST00000624854ENSG00000279334ENST00000624271ENSG00000279527ENST00000623659ENSG00000280097ENST00000624126ENSG00000280354ENST00000624885ENSG00000280444ENST00000624789CIL_000399_0002ENSMUSG00000037936ENSMUST00000086075ENSMUST00000111390ENSMUST00000123338ENSMUST00000148373
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073060 ENST00000261693 49.681±0.00 11.885±0.00 N/A 4.679±0.00 29.577±0.00 7.799±6.45 3.693±0.00 8.931±5.47 96.184±0.00 7.621±0.00 1.392±0.00 51.088±52.18 187.351±138.18 6.303±1.24
ENST00000339570 N/A N/A N/A 1.016±0.00 N/A N/A N/A 2.754±0.00 N/A N/A N/A N/A N/A N/A
ENST00000415380 N/A N/A N/A 3.552±0.00 N/A N/A N/A N/A N/A N/A 2.473±1.30 N/A N/A N/A
ENST00000535005 N/A N/A N/A 1.304±0.00 N/A N/A 0.353±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000538291 N/A 1.082±0.00 0.135±0.00 0.708±0.47 2.063±1.29 0.195±0.00 0.979±0.00 0.473±0.00 0.832±0.00 1.000±0.00 0.296±0.10 2.382±1.48 N/A 2.542±0.55
ENST00000539320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.415±0.00 N/A 5.796±0.00
ENST00000545305 41.404±0.00 14.276±0.00 0.540±0.00 12.474±0.00 37.317±0.00 11.190±10.07 N/A 4.495±0.00 58.267±0.00 N/A N/A N/A N/A 16.478±0.00
ENST00000545493 N/A N/A N/A N/A N/A N/A N/A N/A 2.322±0.00 N/A N/A N/A N/A N/A
ENST00000546215 23.562±0.00 N/A 0.620±0.00 7.468±0.00 6.745±5.65 11.440±0.00 N/A 11.402±0.00 N/A 1.817±0.00 N/A 2.238±0.00 17.599±0.00 N/A
ENSG00000196498 ENST00000356219 N/A 6.195±0.00 N/A 4.425±0.00 1.227±0.00 6.596±6.01 N/A N/A N/A N/A N/A 49.590±0.00 N/A 4.299±0.00
ENST00000404121 9.507±0.00 5.847±0.00 0.705±0.00 4.561±0.00 10.422±0.00 N/A 7.874±0.00 N/A N/A 0.565±0.00 N/A N/A 5.714±0.78 6.405±0.00
ENST00000404621 17.490±0.00 10.683±0.00 N/A 3.925±3.32 10.206±0.00 13.683±0.00 N/A N/A 1.524±0.54 3.812±2.85 17.926±0.00 23.835±22.63 4.116±0.15 4.621±3.09
ENST00000405201 7.788±0.00 N/A 0.476±0.00 4.550±3.76 6.267±0.00 N/A N/A 3.530±0.00 1.154±0.00 7.910±0.00 N/A 12.948±5.21 3.997±2.13 3.398±0.09
ENST00000413172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420698 N/A N/A 2.714±0.00 3.512±0.00 4.184±0.00 2.076±0.00 3.297±0.00 2.029±0.00 6.424±0.00 2.420±0.00 4.094±0.00 23.201±16.32 N/A 5.111±0.00
ENST00000429285 N/A N/A N/A N/A N/A 0.365±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 172.872±0.00 60.085±0.00 25.644±0.00
ENST00000448008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458234 N/A N/A N/A N/A N/A 1.106±0.00 N/A 1.623±0.00 1.622±0.00 1.085±0.00 N/A N/A N/A N/A
ENST00000461081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214650 ENST00000543970 0.053±0.00 0.322±0.00 0.392±0.00 0.101±0.07 0.337±0.01 0.266±0.24 0.094±0.05 0.160±0.04 0.138±0.11 0.211±0.13 0.125±0.00 0.141±0.08 N/A 0.736±0.23
ENSG00000255965 ENST00000545095 N/A N/A N/A N/A N/A N/A N/A 1.445±0.00 8.491±0.00 N/A 7.050±0.00 12.297±11.47 N/A N/A
ENSG00000278973 ENST00000623062 0.027±0.00 N/A N/A 0.072±0.00 0.529±0.00 N/A N/A N/A N/A 0.032±0.00 N/A 0.132±0.10 0.081±0.00 0.499±0.47
ENSG00000279071 ENST00000625118 0.087±0.00 0.080±0.00 0.031±0.00 0.061±0.00 0.200±0.14 0.070±0.04 0.079±0.00 0.137±0.00 0.061±0.05 0.171±0.00 0.129±0.00 0.195±0.12 0.053±0.00 0.029±0.00
ENSG00000279121 ENST00000624854 N/A N/A 0.513±0.00 0.053±0.00 N/A N/A 0.044±0.00 N/A N/A N/A N/A 0.212±0.10 N/A N/A
ENSG00000279334 ENST00000624271 N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A
ENSG00000279527 ENST00000623659 0.043±0.00 N/A 1.018±0.00 0.021±0.00 0.150±0.05 1.218±0.00 0.371±0.00 N/A 1.200±0.00 0.292±0.00 N/A 0.207±0.00 N/A 1.264±1.17
ENSG00000280097 ENST00000624126 N/A N/A N/A 0.206±0.00 N/A N/A 0.057±0.00 N/A N/A 0.065±0.00 N/A 0.146±0.02 0.179±0.00 0.105±0.00
ENSG00000280354 ENST00000624885 N/A 0.535±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.403±0.23 N/A N/A
ENSG00000280444 ENST00000624789 N/A N/A N/A N/A 0.066±0.00 N/A N/A 1.170±0.00 N/A 0.207±0.00 N/A 0.237±0.04 0.090±0.00 0.822±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037936 ENSMUST00000086075 65.684±19.37 1048.744±57.86 31.488±0.57 3.700±0.04 74.840±8.82 20.530±2.38 10.345±4.35 10.477±2.82 53.431±13.74 61.359±10.91 6.303±0.99 346.004±70.03 52.519±33.37 18.016±9.23
ENSMUST00000111390 38.117±8.47 257.863±10.16 6.590±0.19 6.865±1.76 46.004±6.80 4.153±0.49 8.798±0.32 4.390±0.76 26.196±8.61 24.760±3.06 3.636±0.99 104.881±19.06 18.811±8.93 37.536±25.15
ENSMUST00000123338 N/A N/A N/A 6.055±0.00 N/A N/A N/A N/A N/A N/A N/A 159.218±0.00 65.128±50.10 9.473±0.00
ENSMUST00000124582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148373 N/A N/A N/A 4.822±0.00 N/A N/A N/A N/A N/A N/A N/A 73.969±14.35 N/A 7.609±0.00
ENSMUST00000156532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading