C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000399_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196498-ENSG00000073060 CGP 9606 12:124324415-124882668
GeneTranscriptPositionBiotype
ENSG00000073060 (SCARB1)
scavenger receptor class B, member 1 		ENST00000261693 (SCARB1-004) 124777633-124863847 protein_coding
ENST00000339570 (SCARB1-001) 124776856-124863917 protein_coding
ENST00000415380 (SCARB1-006) 124777633-124863846 protein_coding
ENST00000535005 (SCARB1-003) 124782683-124880461 processed_transcript
ENST00000538291 (SCARB1-005) 124778278-124863863 retained_intron
ENST00000539320 (SCARB1-011) 124814973-124863896 processed_transcript
ENST00000541661 (SCARB1-013) 124814964-124882668 processed_transcript
ENST00000544327 (SCARB1-009) 124785820-124817707 protein_coding
ENST00000545305 (SCARB1-010) 124777873-124786493 processed_transcript
ENST00000545493 (SCARB1-012) 124814961-124863863 protein_coding
ENST00000546215 (SCARB1-007) 124778499-124863783 protein_coding
ENSG00000196498 (NCOR2)
nuclear receptor corepressor 2 		ENST00000356219 (NCOR2-201) 124324416-124422554 protein_coding
ENST00000404121 (NCOR2-202) 124324416-124422554 protein_coding
ENST00000404621 (NCOR2-002) 124324415-124535603 protein_coding
ENST00000405201 (NCOR2-005) 124324415-124495252 protein_coding
ENST00000413172 (NCOR2-018) 124325420-124327585 protein_coding
ENST00000418829 (NCOR2-017) 124325380-124332345 protein_coding
ENST00000420698 (NCOR2-004) 124419959-124518294 protein_coding
ENST00000429285 (NCOR2-001) 124324598-124535603 protein_coding
ENST00000440187 (NCOR2-013) 124337104-124341863 protein_coding
ENST00000440337 (NCOR2-015) 124328532-124333256 protein_coding
ENST00000443451 (NCOR2-022) 124325386-124334646 retained_intron
ENST00000448008 (NCOR2-019) 124430641-124483769 protein_coding
ENST00000448614 (NCOR2-009) 124372460-124388824 protein_coding
ENST00000453428 (NCOR2-012) 124340007-124342055 protein_coding
ENST00000458234 (NCOR2-003) 124346593-124567464 protein_coding
ENST00000461081 (NCOR2-006) 124331475-124336392 retained_intron
ENST00000464377 (NCOR2-016) 124326123-124327659 retained_intron
ENST00000473999 (NCOR2-011) 124347402-124348940 retained_intron
ENST00000474079 (NCOR2-014) 124334344-124335181 retained_intron
ENST00000493859 (NCOR2-010) 124355059-124356685 retained_intron
ENST00000494460 (NCOR2-007) 124429395-124430641 retained_intron
ENST00000536195 (NCOR2-020) 124354837-124356850 retained_intron
ENST00000542565 (NCOR2-008) 124486374-124567589 retained_intron
ENST00000542927 (NCOR2-024) 124430610-124483774 protein_coding
ENSG00000214650 (RP11-83B20.1)
 ENST00000543970 (RP11-83B20.1-001) 124513222-124514813 lincRNA
ENSG00000255965 (RP11-408I18.9)
 ENST00000545095 (RP11-408I18.9-001) 124383381-124383510 processed_pseudogene
ENSG00000278973 (RP11-83B20.9)
 ENST00000623062 (RP11-83B20.9-001) 124622290-124623069 TEC
ENSG00000279071 (RP11-83B20.3)
 ENST00000625118 (RP11-83B20.3-001) 124537844-124539677 TEC
ENSG00000279121 (RP11-83B20.5)
 ENST00000624854 (RP11-83B20.5-001) 124555905-124556432 TEC
ENSG00000279334 (RP11-83B20.6)
 ENST00000624271 (RP11-83B20.6-001) 124561869-124562283 TEC
ENSG00000279527 (RP11-83B20.2)
 ENST00000623659 (RP11-83B20.2-001) 124529722-124530228 TEC
ENSG00000280097 (RP11-83B20.7)
 ENST00000624126 (RP11-83B20.7-001) 124593181-124593691 TEC
ENSG00000280354 (RP11-83B20.4)
 ENST00000624885 (RP11-83B20.4-001) 124542503-124542873 TEC
ENSG00000280444 (RP11-83B20.8)
 ENST00000624789 (RP11-83B20.8-001) 124623391-124623987 TEC
CIL_000399_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029478-ENSMUSG00000037936 CGP 10090 5:125017153-125341094
GeneTranscriptPositionBiotype
ENSMUSG00000037936 (Scarb1)
scavenger receptor class B, member 1 		ENSMUST00000086075 (Scarb1-001) 125277087-125341094 protein_coding
ENSMUST00000111390 (Scarb1-002) 125277089-125341071 protein_coding
ENSMUST00000123338 (Scarb1-009) 125297319-125304542 processed_transcript
ENSMUST00000124582 (Scarb1-010) 125277787-125284159 processed_transcript
ENSMUST00000127148 (Scarb1-005) 125277566-125294109 protein_coding
ENSMUST00000133624 (Scarb1-008) 125300360-125316632 processed_transcript
ENSMUST00000135736 (Scarb1-004) 125282950-125286677 retained_intron
ENSMUST00000137783 (Scarb1-006) 125304179-125340008 protein_coding
ENSMUST00000148373 (Scarb1-003) 125283355-125341019 retained_intron
ENSMUST00000156532 (Scarb1-007) 125304249-125326267 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000399_0001ENSG00000073060ENST00000261693ENST00000339570ENST00000415380ENST00000535005ENST00000538291ENST00000544327ENST00000545305ENST00000545493ENST00000546215ENSG00000196498ENST00000356219ENST00000404121ENST00000404621ENST00000405201ENST00000420698ENST00000429285ENST00000443451ENST00000458234ENSG00000214650ENST00000543970ENSG00000255965ENST00000545095ENSG00000278973ENST00000623062ENSG00000279071ENST00000625118ENSG00000279121ENST00000624854ENSG00000279334ENST00000624271ENSG00000279527ENST00000623659ENSG00000280097ENST00000624126ENSG00000280354ENST00000624885ENSG00000280444ENST00000624789CIL_000399_0002ENSMUSG00000037936ENSMUST00000086075ENSMUST00000111390ENSMUST00000123338ENSMUST00000148373
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073060 ENST00000261693 49.681±0.00 11.885±0.00 N/A 4.679±0.00 29.577±0.00 7.799±6.45 3.693±0.00 8.931±5.47 96.184±0.00 7.621±0.00 1.392±0.00 51.088±52.18 187.351±138.18 6.303±1.24
ENST00000339570 N/A N/A N/A 1.016±0.00 N/A N/A N/A 2.754±0.00 N/A N/A N/A N/A N/A N/A
ENST00000415380 N/A N/A N/A 3.552±0.00 N/A N/A N/A N/A N/A N/A 2.473±1.30 N/A N/A N/A
ENST00000535005 N/A N/A N/A 1.304±0.00 N/A N/A 0.353±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000538291 N/A 1.082±0.00 0.135±0.00 0.708±0.47 2.063±1.29 0.195±0.00 0.979±0.00 0.473±0.00 0.832±0.00 1.000±0.00 0.296±0.10 2.382±1.48 N/A 2.542±0.55
ENST00000539320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.415±0.00 N/A 5.796±0.00
ENST00000545305 41.404±0.00 14.276±0.00 0.540±0.00 12.474±0.00 37.317±0.00 11.190±10.07 N/A 4.495±0.00 58.267±0.00 N/A N/A N/A N/A 16.478±0.00
ENST00000545493 N/A N/A N/A N/A N/A N/A N/A N/A 2.322±0.00 N/A N/A N/A N/A N/A
ENST00000546215 23.562±0.00 N/A 0.620±0.00 7.468±0.00 6.745±5.65 11.440±0.00 N/A 11.402±0.00 N/A 1.817±0.00 N/A 2.238±0.00 17.599±0.00 N/A
ENSG00000196498 ENST00000356219 N/A 6.195±0.00 N/A 4.425±0.00 1.227±0.00 6.596±6.01 N/A N/A N/A N/A N/A 49.590±0.00 N/A 4.299±0.00
ENST00000404121 9.507±0.00 5.847±0.00 0.705±0.00 4.561±0.00 10.422±0.00 N/A 7.874±0.00 N/A N/A 0.565±0.00 N/A N/A 5.714±0.78 6.405±0.00
ENST00000404621 17.490±0.00 10.683±0.00 N/A 3.925±3.32 10.206±0.00 13.683±0.00 N/A N/A 1.524±0.54 3.812±2.85 17.926±0.00 23.835±22.63 4.116±0.15 4.621±3.09
ENST00000405201 7.788±0.00 N/A 0.476±0.00 4.550±3.76 6.267±0.00 N/A N/A 3.530±0.00 1.154±0.00 7.910±0.00 N/A 12.948±5.21 3.997±2.13 3.398±0.09
ENST00000413172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420698 N/A N/A 2.714±0.00 3.512±0.00 4.184±0.00 2.076±0.00 3.297±0.00 2.029±0.00 6.424±0.00 2.420±0.00 4.094±0.00 23.201±16.32 N/A 5.111±0.00
ENST00000429285 N/A N/A N/A N/A N/A 0.365±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 172.872±0.00 60.085±0.00 25.644±0.00
ENST00000448008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458234 N/A N/A N/A N/A N/A 1.106±0.00 N/A 1.623±0.00 1.622±0.00 1.085±0.00 N/A N/A N/A N/A
ENST00000461081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214650 ENST00000543970 0.053±0.00 0.322±0.00 0.392±0.00 0.101±0.07 0.337±0.01 0.266±0.24 0.094±0.05 0.160±0.04 0.138±0.11 0.211±0.13 0.125±0.00 0.141±0.08 N/A 0.736±0.23
ENSG00000255965 ENST00000545095 N/A N/A N/A N/A N/A N/A N/A 1.445±0.00 8.491±0.00 N/A 7.050±0.00 12.297±11.47 N/A N/A
ENSG00000278973 ENST00000623062 0.027±0.00 N/A N/A 0.072±0.00 0.529±0.00 N/A N/A N/A N/A 0.032±0.00 N/A 0.132±0.10 0.081±0.00 0.499±0.47
ENSG00000279071 ENST00000625118 0.087±0.00 0.080±0.00 0.031±0.00 0.061±0.00 0.200±0.14 0.070±0.04 0.079±0.00 0.137±0.00 0.061±0.05 0.171±0.00 0.129±0.00 0.195±0.12 0.053±0.00 0.029±0.00
ENSG00000279121 ENST00000624854 N/A N/A 0.513±0.00 0.053±0.00 N/A N/A 0.044±0.00 N/A N/A N/A N/A 0.212±0.10 N/A N/A
ENSG00000279334 ENST00000624271 N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A
ENSG00000279527 ENST00000623659 0.043±0.00 N/A 1.018±0.00 0.021±0.00 0.150±0.05 1.218±0.00 0.371±0.00 N/A 1.200±0.00 0.292±0.00 N/A 0.207±0.00 N/A 1.264±1.17
ENSG00000280097 ENST00000624126 N/A N/A N/A 0.206±0.00 N/A N/A 0.057±0.00 N/A N/A 0.065±0.00 N/A 0.146±0.02 0.179±0.00 0.105±0.00
ENSG00000280354 ENST00000624885 N/A 0.535±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.403±0.23 N/A N/A
ENSG00000280444 ENST00000624789 N/A N/A N/A N/A 0.066±0.00 N/A N/A 1.170±0.00 N/A 0.207±0.00 N/A 0.237±0.04 0.090±0.00 0.822±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037936 ENSMUST00000086075 65.684±19.37 1048.744±57.86 31.488±0.57 3.700±0.04 74.840±8.82 20.530±2.38 10.345±4.35 10.477±2.82 53.431±13.74 61.359±10.91 6.303±0.99 346.004±70.03 52.519±33.37 18.016±9.23
ENSMUST00000111390 38.117±8.47 257.863±10.16 6.590±0.19 6.865±1.76 46.004±6.80 4.153±0.49 8.798±0.32 4.390±0.76 26.196±8.61 24.760±3.06 3.636±0.99 104.881±19.06 18.811±8.93 37.536±25.15
ENSMUST00000123338 N/A N/A N/A 6.055±0.00 N/A N/A N/A N/A N/A N/A N/A 159.218±0.00 65.128±50.10 9.473±0.00
ENSMUST00000124582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148373 N/A N/A N/A 4.822±0.00 N/A N/A N/A N/A N/A N/A N/A 73.969±14.35 N/A 7.609±0.00
ENSMUST00000156532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading