C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil serine rich 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134710 Ccser1-005 ENSMUSG00000039578 10090 + 6:61570670-61820586 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000134710
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000134710 0.183±0.00 0.331±0.00 1.167±0.34 0.308±0.00 0.134±0.12 1.251±0.31 0.056±0.04 1.709±0.07 0.057±0.04 0.285±0.12 1.194±0.65 0.077±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083N CIL_00083N_0002 VISTA 6:60741566-61344404
CIL_0000KN CIL_0000KN_0002 CGP 6:60924976-62382865
CIL_0001RV CIL_0001RV_0003 CGP 6:61180324-64668282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000432775 CCSER1-002 protein_coding Homo_sapiens 0 259
ENST00000502478 CCSER1-008 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000505073 CCSER1-003 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000509176 CCSER1-001 protein_coding Homo_sapiens 0 425
ENST00000513522 CCSER1-009 nonsense_mediated_decay Homo_sapiens 0 547

Loading