C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135140 Rnf25-002 ENSMUSG00000026171 10090 - 1:74593748-74601372 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMusclePlacentaTestisENSMUST00000135140
Transcript ID Brain Muscle Placenta Testis
ENSMUST00000135140 8.684±0.00 1.005±0.05 3.616±0.89 4.690±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000654 CIL_000654_0002 CGP 1:74588289-74601397
CIL_0006PW CIL_0006PW_0002 CGP 1:74593748-74636894

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295704 RNF25-001 protein_coding Homo_sapiens 0 1284
ENST00000423170 RNF25-004 nonsense_mediated_decay Homo_sapiens 0 562
ENST00000463188 RNF25-003 retained_intron Homo_sapiens 0 592
ENST00000473034 RNF25-002 retained_intron Homo_sapiens 0 1194
ENST00000497832 RNF25-005 retained_intron Homo_sapiens 0 302

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