C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nebulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135200 Neb-003 ENSMUSG00000026950 10090 - 2:52137261-52176614 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLungMuscleOvaryPlacentaTestisENSMUST00000135200
Transcript ID Adrenal Brain Lung Muscle Ovary Placenta Testis
ENSMUST00000135200 0.308±0.06 0.833±0.00 0.198±0.00 459.760±72.13 1.951±1.02 0.239±0.06 0.234±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S6 CIL_0003S6_0003 CGP 2:52072837-52338798
CIL_0003RZ CIL_0003RZ_0003 CGP 2:52136647-52424901

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143888 neb-001 protein_coding Danio_rerio 0 272
ENSDART00000140686 neb-004 processed_transcript Danio_rerio 0 206
ENSDART00000137045 neb-003 processed_transcript Danio_rerio 0 198
ENSDART00000142585 neb-002 protein_coding Danio_rerio 1e-25 122
ENSDART00000101711 neb-201 protein_coding Danio_rerio 7e-23 113
ENSDART00000146486 neb-007 protein_coding Danio_rerio 7e-23 113
ENST00000172853 NEB-201 protein_coding Homo_sapiens 0 1040
ENST00000397337 NEB-004 protein_coding Homo_sapiens 0 1040
ENST00000397345 NEB-202 protein_coding Homo_sapiens 0 1040
ENST00000409198 NEB-001 protein_coding Homo_sapiens 0 1040
ENST00000413693 NEB-002 protein_coding Homo_sapiens 0 1120
ENST00000421461 NEB-014 protein_coding Homo_sapiens 8.96831e-44 182
ENST00000427231 NEB-203 protein_coding Homo_sapiens 0 1040
ENST00000434685 NEB-003 protein_coding Homo_sapiens 0 2896
ENST00000483418 NEB-011 retained_intron Homo_sapiens 0 514
ENST00000497809 NEB-007 retained_intron Homo_sapiens 0 396
ENST00000498015 NEB-016 processed_transcript Homo_sapiens 0 409
ENST00000603639 NEB-017 protein_coding Homo_sapiens 0 1040
ENST00000604864 NEB-018 protein_coding Homo_sapiens 0 1040
ENST00000618972 NEB-204 protein_coding Homo_sapiens 0 1040

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