C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nebulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413693 NEB-002 ENSG00000183091 9606 - 2:151485341-151583619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartTestisENST00000413693
Transcript ID Breast Heart Testis
ENST00000413693 4.664±0.00 1.072±0.00 11.885±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S5 CIL_0003S5_0002 CGP 2:151357592-151508013
CIL_0003S6 CIL_0003S6_0002 CGP 2:151409883-151734487
CIL_0003RZ CIL_0003RZ_0002 CGP 2:151485336-151828492

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028320 Neb-002 protein_coding Mus_musculus 0 10950
ENSMUST00000036934 Neb-201 protein_coding Mus_musculus 0 9330
ENSMUST00000075301 Neb-001 protein_coding Mus_musculus 0 9164
ENSMUST00000137410 Neb-006 processed_transcript Mus_musculus 0 1225
ENSMUST00000135200 Neb-003 protein_coding Mus_musculus 0 1120
ENSMUST00000148356 Neb-012 protein_coding Mus_musculus 0 752
ENSMUST00000152851 Neb-009 processed_transcript Mus_musculus 0 682
ENSMUST00000131236 Neb-007 processed_transcript Mus_musculus 0 316
ENSMUST00000139672 Neb-004 protein_coding Mus_musculus 0 315

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