C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003S6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062650-ENSDARG00000032630 CGP 7955 9:23814364-23926183
GeneTranscriptPositionBiotype
ENSDARG00000032630 (neb)
nebulin 		ENSDART00000101711 (neb-201) 23838708-23867972 protein_coding
ENSDART00000134090 (neb-005) 23845145-23857712 retained_intron
ENSDART00000137045 (neb-003) 23857546-23862091 processed_transcript
ENSDART00000137778 (neb-008) 23839089-23843138 retained_intron
ENSDART00000140686 (neb-004) 23855205-23861789 processed_transcript
ENSDART00000142020 (neb-006) 23845190-23855429 protein_coding
ENSDART00000142585 (neb-002) 23838690-23865181 protein_coding
ENSDART00000143888 (neb-001) 23838483-23926183 protein_coding
ENSDART00000146486 (neb-007) 23845146-23868205 protein_coding
ENSDARG00000062650 (rif1)
RAP1 interacting factor homolog (yeast) 		ENSDART00000090816 (rif1-201) 23815372-23835249 protein_coding
ENSDART00000110992 (rif1-202) 23815369-23835249 protein_coding
ENSDART00000143972 (rif1-001) 23814364-23835517 protein_coding
CIL_0003S6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000080345-ENSG00000183091 CGP 9606 2:151409883-151734487
GeneTranscriptPositionBiotype
ENSG00000080345 (RIF1)
replication timing regulatory factor 1 		ENST00000243326 (RIF1-001) 151409941-151482172 protein_coding
ENST00000414861 (RIF1-006) 151409956-151455110 protein_coding
ENST00000428287 (RIF1-004) 151409886-151475388 protein_coding
ENST00000430328 (RIF1-007) 151410090-151475388 protein_coding
ENST00000444746 (RIF1-003) 151409883-151475388 protein_coding
ENST00000453091 (RIF1-002) 151409883-151475622 protein_coding
ENST00000454583 (RIF1-008) 151464700-151508013 nonsense_mediated_decay
ENST00000457745 (RIF1-009) 151486277-151498213 processed_transcript
ENST00000467762 (RIF1-012) 151505948-151507112 processed_transcript
ENST00000484077 (RIF1-010) 151494975-151498215 processed_transcript
ENST00000494333 (RIF1-005) 151409900-151420379 processed_transcript
ENST00000498041 (RIF1-014) 151420225-151423760 processed_transcript
CIL_0003S6_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036202-ENSMUSG00000026950 CGP 10090 2:52072837-52338798
GeneTranscriptPositionBiotype
ENSMUSG00000026950 (Neb)
nebulin 		ENSMUST00000028320 (Neb-002) 52136662-52223737 protein_coding
ENSMUST00000036934 (Neb-201) 52136647-52338798 protein_coding
ENSMUST00000075301 (Neb-001) 52136662-52335134 protein_coding
ENSMUST00000127339 (Neb-011) 52319634-52335762 processed_transcript
ENSMUST00000131236 (Neb-007) 52173559-52176037 processed_transcript
ENSMUST00000135200 (Neb-003) 52137261-52176614 protein_coding
ENSMUST00000136769 (Neb-010) 52328834-52338798 processed_transcript
ENSMUST00000137410 (Neb-006) 52137117-52157912 processed_transcript
ENSMUST00000139672 (Neb-004) 52221782-52256156 protein_coding
ENSMUST00000148356 (Neb-012) 52178046-52192520 protein_coding
ENSMUST00000152851 (Neb-009) 52156341-52163009 processed_transcript
ENSMUSG00000036202 (Rif1)
Rap1 interacting factor 1 homolog (yeast) 		ENSMUST00000069794 (Rif1-001) 52072842-52122383 protein_coding
ENSMUST00000112693 (Rif1-201) 52072837-52122381 protein_coding
ENSMUST00000125116 (Rif1-007) 52093195-52098444 processed_transcript
ENSMUST00000125322 (Rif1-004) 52110984-52122056 processed_transcript
ENSMUST00000125376 (Rif1-005) 52111461-52122109 processed_transcript
ENSMUST00000126218 (Rif1-006) 52073072-52076205 processed_transcript
ENSMUST00000145130 (Rif1-002) 52089573-52107725 processed_transcript
ENSMUST00000152178 (Rif1-003) 52112133-52122381 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003S6_0001ENSDARG00000032630ENSDART00000101711ENSDART00000134090ENSDART00000137045ENSDART00000137778ENSDART00000140686ENSDART00000142020ENSDART00000142585ENSDART00000143888ENSDART00000146486ENSDARG00000062650ENSDART00000090816ENSDART00000110992ENSDART00000143972CIL_0003S6_0002ENSG00000080345ENST00000243326ENST00000414861ENST00000428287ENST00000430328ENST00000444746ENST00000453091ENST00000454583ENST00000457745ENST00000467762ENST00000484077ENST00000494333ENST00000498041CIL_0003S6_0003ENSMUSG00000026950ENSMUST00000028320ENSMUST00000036934ENSMUST00000075301ENSMUST00000127339ENSMUST00000131236ENSMUST00000135200ENSMUST00000136769ENSMUST00000137410ENSMUST00000139672ENSMUST00000148356ENSMUST00000152851ENSMUSG00000036202ENSMUST00000069794ENSMUST00000112693ENSMUST00000125116ENSMUST00000125322ENSMUST00000125376ENSMUST00000126218ENSMUST00000145130ENSMUST00000152178
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003S6_0001ENSDARG00000032630ENSDART00000101711ENSDART00000137778ENSDART00000143888ENSDART00000146486ENSDARG00000062650ENSDART00000090816ENSDART00000110992ENSDART00000143972CIL_0003S6_0002ENSG00000080345ENST00000243326ENST00000428287ENST00000430328ENST00000444746ENST00000453091CIL_0003S6_0003ENSMUSG00000026950ENSMUST00000028320ENSMUST00000036934ENSMUST00000075301ENSMUST00000131236ENSMUST00000135200ENSMUST00000137410ENSMUST00000139672ENSMUST00000148356ENSMUST00000152851ENSMUSG00000036202ENSMUST00000069794ENSMUST00000112693ENSMUST00000125322ENSMUST00000125376ENSMUST00000126218ENSMUST00000145130ENSMUST00000152178
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032630 ENSDART00000101711 N/A N/A N/A N/A N/A N/A 0.151±0.06 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137778 N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A 0.377±0.00 N/A N/A N/A N/A N/A
ENSDART00000140686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143888 N/A N/A N/A 0.117±0.02 N/A N/A 0.022±0.00 0.553±0.37 0.013±0.00 N/A N/A N/A N/A N/A
ENSDART00000146486 N/A N/A N/A 0.738±0.00 N/A N/A N/A N/A 0.312±0.00 N/A 301.657±0.00 N/A N/A N/A
ENSDARG00000062650 ENSDART00000090816 N/A N/A N/A 1.518±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000110992 N/A N/A N/A N/A N/A N/A N/A N/A 0.163±0.00 N/A 0.387±0.00 N/A N/A N/A
ENSDART00000143972 N/A N/A N/A 2.030±1.49 N/A N/A 0.896±0.00 2.205±2.01 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080345 ENST00000243326 1.533±0.00 0.675±0.00 N/A 1.282±0.00 2.164±0.66 1.769±0.67 0.760±0.16 N/A 0.177±0.00 2.929±0.00 N/A 2.465±2.24 0.775±0.00 2.177±1.09
ENST00000414861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428287 N/A N/A N/A N/A N/A N/A N/A 1.198±0.00 N/A 1.981±0.00 N/A N/A N/A N/A
ENST00000430328 N/A N/A N/A N/A N/A N/A N/A N/A 2.988±0.00 N/A N/A N/A N/A N/A
ENST00000444746 N/A N/A N/A 1.176±0.00 N/A 2.186±0.00 0.900±0.00 N/A 3.727±0.00 1.911±0.00 N/A 7.052±0.00 N/A N/A
ENST00000453091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.871±0.00 5.985±0.00
ENST00000454583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026950 ENSMUST00000028320 0.075±0.03 0.061±0.02 N/A 0.238±0.09 8.571±7.36 0.031±0.00 0.119±0.00 0.165±0.21 0.287±0.18 0.500±0.66 157.648±54.92 0.428±0.21 0.065±0.03 0.068±0.03
ENSMUST00000036934 N/A 0.109±0.00 N/A N/A 2.194±0.73 0.013±0.00 0.029±0.00 0.005±0.00 N/A N/A 29.429±0.00 0.075±0.02 N/A 0.026±0.00
ENSMUST00000075301 0.015±0.00 N/A N/A 0.059±0.00 1.445±1.48 0.010±0.00 0.051±0.02 N/A 0.214±0.00 0.561±0.54 23.855±0.00 0.067±0.02 0.025±0.00 0.038±0.00
ENSMUST00000127339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131236 N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000135200 N/A 0.308±0.06 N/A 0.833±0.00 N/A N/A N/A N/A N/A 0.198±0.00 459.760±72.13 1.951±1.02 0.239±0.06 0.234±0.00
ENSMUST00000136769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137410 0.201±0.03 0.554±0.10 N/A 0.121±0.00 0.093±0.02 0.114±0.05 N/A 0.145±0.04 1.377±0.79 0.224±0.04 N/A 0.680±0.15 N/A 0.380±0.08
ENSMUST00000139672 N/A 0.055±0.00 N/A N/A 0.030±0.00 N/A N/A 0.009±0.00 N/A N/A N/A 0.323±0.10 N/A 0.102±0.00
ENSMUST00000148356 N/A N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152851 N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000036202 ENSMUST00000069794 0.108±0.00 0.205±0.04 N/A N/A 0.310±0.21 0.715±0.00 0.255±0.00 0.412±0.00 0.926±0.50 N/A 0.313±0.06 1.737±0.88 1.297±0.57 2.625±0.00
ENSMUST00000112693 0.320±0.24 0.225±0.00 0.776±0.18 2.019±0.54 0.417±0.37 0.387±0.00 0.246±0.00 0.250±0.07 1.892±1.38 0.502±0.17 0.321±0.06 1.060±0.18 1.044±0.59 1.807±0.78
ENSMUST00000125116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125322 N/A N/A 0.926±0.21 3.564±0.00 N/A N/A N/A N/A N/A N/A 0.783±0.28 6.107±3.23 2.495±2.18 25.418±0.00
ENSMUST00000125376 0.178±0.00 N/A 0.993±0.27 N/A 0.459±0.13 N/A N/A 0.244±0.00 1.207±0.75 N/A 0.432±0.00 1.930±0.00 1.292±0.00 N/A
ENSMUST00000126218 N/A 6.739±1.53 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145130 N/A 0.579±0.00 N/A N/A N/A N/A N/A 0.599±0.00 N/A 0.933±0.00 N/A N/A N/A N/A
ENSMUST00000152178 N/A N/A 3.049±0.70 3.789±0.93 N/A N/A N/A N/A 3.006±1.85 N/A 0.852±0.24 N/A 2.623±0.95 2.571±0.00

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