C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2310003H01 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135635 2310003H01Rik-006 ENSMUSG00000025384 10090 - 11:120369055-120378735 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000135635
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000135635 2.524±0.00 1.227±0.09 3.192±1.81 2.458±0.01 0.918±0.05 1.322±0.26 0.617±0.15 0.964±0.36 2.764±1.34 1.029±0.52 3.580±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BP CIL_0003BP_0002 CGP 11:120361534-120378764
CIL_0003BK CIL_0003BK_0002 CGP 11:120369055-120437708

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327787 C17orf70-001 protein_coding Homo_sapiens 0 1631
ENST00000425898 C17orf70-004 protein_coding Homo_sapiens 0 817
ENST00000443656 C17orf70-002 nonsense_mediated_decay Homo_sapiens 0 1583

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