C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 6A, cGMP-specific, rod, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135688 Pde6a-002 ENSMUSG00000024575 10090 + 18:61275023-61289924 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000135688
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000135688 0.034±0.02 0.119±0.03 0.050±0.00 0.062±0.08 0.073±0.07 0.162±0.07 0.028±0.02 0.446±0.23 0.044±0.03 0.015±0.01 0.023±0.01 0.182±0.11 0.059±0.03 0.177±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255266 PDE6A-001 protein_coding Homo_sapiens 0 532
ENST00000508173 PDE6A-002 retained_intron Homo_sapiens 0 532
ENST00000512670 PDE6A-003 retained_intron Homo_sapiens 4e-25 121
ENST00000613228 PDE6A-201 protein_coding Homo_sapiens 0 532
ENST00000617647 PDE6A-202 protein_coding Homo_sapiens 0 532

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