C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 6A, cGMP-specific, rod, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508173 PDE6A-002 ENSG00000132915 9606 - 5:149857956-149944793 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENST00000508173
Transcript ID Ovary Placenta
ENST00000508173 0.039±0.00 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JR CIL_0001JR_0002 CGP 5:149730298-149944793

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025468 Pde6a-001 protein_coding Mus_musculus 0 1511
ENSMUST00000135688 Pde6a-002 protein_coding Mus_musculus 0 532
ENSMUST00000025956 Pde6c-201 protein_coding Mus_musculus 0 403
ENSMUST00000112329 Pde6c-202 protein_coding Mus_musculus 0 265
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000008 58
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00003 57

Loading