C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Rpgrip1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136198 Rpgrip1l-004 ENSMUSG00000033282 10090 - 8:91269632-91276762 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastOvaryENSMUST00000136198
Transcript ID Adrenal Breast Ovary
ENSMUST00000136198 0.126±0.02 0.351±0.00 0.340±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0003 UCNEbase 8:88447800-92743752
CIL_0007PV CIL_0007PV_0002 VISTA 8:90870647-91472060
CIL_0008IZ CIL_0008IZ_0002 VISTA 8:90885299-91486231
CIL_0007S1 CIL_0007S1_0002 VISTA 8:91005057-91606285
CIL_0007S0 CIL_0007S0_0002 VISTA 8:91042027-91642872
CIL_0005OC CIL_0005OC_0002 CGP 8:91112041-91313262
CIL_0007SA CIL_0007SA_0002 VISTA 8:91191445-91792009
CIL_0007X2 CIL_0007X2_0002 VISTA 8:91208767-91810326
CIL_0005OE CIL_0005OE_0002 CGP 8:91217030-91668439

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262135 RPGRIP1L-003 protein_coding Homo_sapiens 0 861
ENST00000379925 RPGRIP1L-009 protein_coding Homo_sapiens 0 861
ENST00000563746 RPGRIP1L-007 protein_coding Homo_sapiens 0 861
ENST00000564374 RPGRIP1L-001 protein_coding Homo_sapiens 0 861
ENST00000621565 RPGRIP1L-201 protein_coding Homo_sapiens 0 861

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