C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482309 ABCB8-006 ENSG00000197150 9606 + 7:151028426-151045409 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartKidneyLiverOvaryPlacentaTestisENST00000482309
Transcript ID Adipose Heart Kidney Liver Ovary Placenta Testis
ENST00000482309 0.863±0.00 2.222±0.00 0.747±0.00 2.769±0.00 4.144±0.76 8.130±1.90 2.106±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0004O6 CIL_0004O6_0001 CGP 7:151012209-151047782
CIL_0004O7 CIL_0004O7_0001 CGP 7:151028422-151052756

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073076 Abcb8-201 protein_coding Mus_musculus 0 1746
ENSMUST00000115077 Abcb8-001 protein_coding Mus_musculus 0 1746
ENSMUST00000115074 Abcb8-002 protein_coding Mus_musculus 0 878
ENSMUST00000136459 Abcb8-003 retained_intron Mus_musculus 0 531
ENSMUST00000127816 Abcb8-007 retained_intron Mus_musculus 0 468

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