C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: misshapen-like kinase 1 (zebrafish)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136663 Mink1-004 ENSMUSG00000020827 10090 + 11:70601989-70614483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000136663
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000136663 4.504±1.27 3.588±0.05 6.635±0.57 7.797±0.00 7.436±1.47 6.631±1.19 2.074±0.32 6.223±2.04 4.531±1.27 8.273±0.00 1.815±0.85 9.183±2.17 3.893±1.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RG CIL_0001RG_0002 CGP 11:70540064-70614483
CIL_0001R8 CIL_0001R8_0002 CGP 11:70562881-70619216

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051234 tnika-001 protein_coding Danio_rerio 0 662
ENSDART00000097792 tnikb-201 protein_coding Danio_rerio 0 651
ENSDART00000008374 tnikb-002 protein_coding Danio_rerio 0 634
ENSDART00000138089 tnikb-003 processed_transcript Danio_rerio 0 276
ENST00000293780 CHRNE-001 protein_coding Homo_sapiens 0 220
ENST00000347992 MINK1-002 protein_coding Homo_sapiens 0 3096
ENST00000355280 MINK1-001 protein_coding Homo_sapiens 0 5321
ENST00000453408 MINK1-003 protein_coding Homo_sapiens 0 2802
ENST00000571207 MINK1-006 nonsense_mediated_decay Homo_sapiens 0 3103
ENST00000572304 MINK1-012 retained_intron Homo_sapiens 6.99949e-42 174
ENST00000572330 MINK1-004 retained_intron Homo_sapiens 0 2929
ENST00000572629 MINK1-010 retained_intron Homo_sapiens 0 289
ENST00000574453 MINK1-005 nonsense_mediated_decay Homo_sapiens 0 2944
ENST00000574871 MINK1-008 retained_intron Homo_sapiens 0 830
ENST00000575511 MINK1-013 retained_intron Homo_sapiens 0 514
ENST00000576037 MINK1-014 protein_coding Homo_sapiens 0 649
ENST00000577021 MINK1-009 nonsense_mediated_decay Homo_sapiens 0 366

Loading