C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L36, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136893 Rpl36-ps2-001 ENSMUSG00000024205 10090 + 11:76601319-76601629 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000136893
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000136893 5.671±1.26 4.802±1.26 8.958±7.58 6.744±0.41 3.206±0.89 3.476±2.00 2.404±0.50 1.999±0.64 3.856±3.98 2.310±1.07 13.142±11.01 1.349±0.39 2.944±1.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012J CIL_00012J_0002 CGP 11:76406952-76622314
CIL_0001Q6 CIL_0001Q6_0002 CGP 11:76416734-76673676

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347512 RPL36-003 protein_coding Homo_sapiens 0 329
ENST00000394580 RPL36-004 protein_coding Homo_sapiens 0 329
ENST00000407266 RP3-340B19.5-001 processed_pseudogene Homo_sapiens 2.99878e-43 178
ENST00000423857 CTA-85E5.7-001 processed_pseudogene Homo_sapiens 0 196
ENST00000426026 RPL36P2-001 processed_pseudogene Homo_sapiens 0 228
ENST00000442164 RP11-4M23.7-001 processed_pseudogene Homo_sapiens 0 200
ENST00000449443 RP11-95P9.1-001 processed_pseudogene Homo_sapiens 0 231
ENST00000477971 RP11-630D6.1-001 processed_pseudogene Homo_sapiens 0 220
ENST00000488095 RP1-146I3.1-001 processed_pseudogene Homo_sapiens 0 302
ENST00000577222 RPL36-001 protein_coding Homo_sapiens 0 329
ENST00000579446 RPL36-007 protein_coding Homo_sapiens 0 243
ENST00000579649 RPL36-006 protein_coding Homo_sapiens 0 329
ENST00000582463 RPL36-005 protein_coding Homo_sapiens 2e-23 111
ENST00000590786 RPL36-008 retained_intron Homo_sapiens 9e-23 111

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