C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenocysteine lyase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137074 Scly-010 ENSMUSG00000026307 10090 + 1:91302797-91309872 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D3 CIL_0008D3_0002 VISTA 1:90908179-91512308
CIL_0003NI CIL_0003NI_0002 CGP 1:91250304-91321075
CIL_0004L3 CIL_0004L3_0003 CGP 1:91298338-91348306

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001887 IMP selenium compound metabolic process
GO:0003824 IEA catalytic activity
GO:0006629 IMP lipid metabolic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0032868 IMP response to insulin
GO:1900408 IMP negative regulation of cellular response to oxidative stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254663 SCLY-001 protein_coding Homo_sapiens 0 449
ENST00000409736 SCLY-003 protein_coding Homo_sapiens 0 449
ENST00000416757 SCLY-013 protein_coding Homo_sapiens 2e-34 150
ENST00000443532 SCLY-012 nonsense_mediated_decay Homo_sapiens 0 403
ENST00000446202 SCLY-009 nonsense_mediated_decay Homo_sapiens 9.80909e-45 183
ENST00000449891 UBE2F-SCLY-001 nonsense_mediated_decay Homo_sapiens 0 449
ENST00000480357 SCLY-002 retained_intron Homo_sapiens 1e-33 150
ENST00000480859 SCLY-015 processed_transcript Homo_sapiens 3e-40 169
ENST00000482031 SCLY-016 retained_intron Homo_sapiens 0 403

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