C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004L3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000073813-ENSDARG00000078211 CGP 7955 6:26983944-27046411
GeneTranscriptPositionBiotype
ENSDARG00000073813 (scly)
selenocysteine lyase 		ENSDART00000113596 (scly-201) 26984695-27001142 protein_coding
ENSDART00000114347 (scly-001) 26983944-26997217 protein_coding
ENSDART00000156434 (scly-002) 26983944-26987260 protein_coding
ENSDARG00000078211 (ESPNL (1 of 2))
espin-like 		ENSDART00000108831 (ESPNL (1 of 2)-201) 27044770-27046272 protein_coding
ENSDART00000154759 (ESPNL (1 of 2)-001) 27012731-27046411 protein_coding
CIL_0004L3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132330-ENSG00000144488 CGP 9606 2:238060889-238133287
GeneTranscriptPositionBiotype
ENSG00000132330 (SCLY)
selenocysteine lyase 		ENST00000254663 (SCLY-001) 238060889-238099413 protein_coding
ENST00000409736 (SCLY-003) 238061031-238092083 protein_coding
ENST00000412508 (SCLY-011) 238061054-238098219 protein_coding
ENST00000413463 (SCLY-008) 238061001-238082202 protein_coding
ENST00000416757 (SCLY-013) 238061091-238069836 protein_coding
ENST00000423324 (SCLY-010) 238061043-238083303 nonsense_mediated_decay
ENST00000431487 (SCLY-019) 238069457-238083246 protein_coding
ENST00000433750 (SCLY-017) 238083246-238094849 protein_coding
ENST00000437134 (SCLY-020) 238069464-238099359 protein_coding
ENST00000440143 (SCLY-021) 238082101-238091523 protein_coding
ENST00000443532 (SCLY-012) 238061082-238082221 nonsense_mediated_decay
ENST00000446202 (SCLY-009) 238061020-238081741 nonsense_mediated_decay
ENST00000450965 (SCLY-006) 238081735-238099413 protein_coding
ENST00000463433 (SCLY-018) 238091218-238096186 retained_intron
ENST00000480357 (SCLY-002) 238060928-238099412 retained_intron
ENST00000480859 (SCLY-015) 238061293-238081726 processed_transcript
ENST00000482031 (SCLY-016) 238064360-238083075 retained_intron
ENST00000487197 (SCLY-014) 238061113-238065095 retained_intron
ENST00000497256 (SCLY-007) 238060966-238068231 retained_intron
ENST00000497951 (SCLY-005) 238078565-238091473 retained_intron
ENSG00000144488 (ESPNL)
espin-like 		ENST00000343063 (ESPNL-001) 238100157-238133287 protein_coding
ENST00000409169 (ESPNL-002) 238100420-238133287 protein_coding
ENST00000409506 (ESPNL-003) 238127390-238133287 protein_coding
ENST00000423032 (ESPNL-005) 238127395-238128842 protein_coding
ENST00000477241 (ESPNL-004) 238128948-238133281 processed_transcript
ENST00000612395 (ESPNL-201) 238107886-238133286 protein_coding
CIL_0004L3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026307-ENSMUSG00000049515 CGP 10090 1:91298338-91348306
GeneTranscriptPositionBiotype
ENSMUSG00000026307 (Scly)
selenocysteine lyase 		ENSMUST00000027532 (Scly-001) 91298338-91321075 protein_coding
ENSMUST00000123651 (Scly-004) 91298360-91303511 retained_intron
ENSMUST00000124832 (Scly-007) 91298404-91308709 protein_coding
ENSMUST00000137074 (Scly-010) 91302797-91309872 protein_coding
ENSMUST00000142488 (Scly-005) 91298368-91308743 protein_coding
ENSMUST00000142802 (Scly-003) 91298427-91305436 processed_transcript
ENSMUST00000145843 (Scly-009) 91299932-91302869 protein_coding
ENSMUST00000147523 (Scly-008) 91298407-91308815 protein_coding
ENSMUST00000153621 (Scly-002) 91298370-91311330 retained_intron
ENSMUST00000154045 (Scly-006) 91298369-91309851 nonsense_mediated_decay
ENSMUSG00000049515 (Espnl)
espin-like 		ENSMUST00000088904 (Espnl-001) 91322075-91348306 protein_coding
ENSMUST00000176156 (Espnl-002) 91322133-91345937 protein_coding
ENSMUSG00000097285 (Gm26683)
predicted gene, 26683 		ENSMUST00000181737 (Gm26683-201) 91297203-91304405 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004L3_0001ENSDARG00000073813ENSDART00000113596ENSDART00000114347ENSDART00000156434ENSDARG00000078211ENSDART00000108831ENSDART00000154759CIL_0004L3_0002ENSG00000132330ENST00000254663ENST00000409736ENST00000412508ENST00000413463ENST00000416757ENST00000423324ENST00000431487ENST00000433750ENST00000437134ENST00000440143ENST00000443532ENST00000446202ENST00000450965ENST00000463433ENST00000480357ENST00000480859ENST00000482031ENST00000487197ENST00000497256ENST00000497951ENSG00000144488ENST00000343063ENST00000409169ENST00000409506ENST00000423032ENST00000477241ENST00000612395CIL_0004L3_0003ENSMUSG00000026307ENSMUST00000027532ENSMUST00000123651ENSMUST00000124832ENSMUST00000137074ENSMUST00000142488ENSMUST00000142802ENSMUST00000145843ENSMUST00000147523ENSMUST00000153621ENSMUST00000154045ENSMUSG00000049515ENSMUST00000088904ENSMUST00000176156ENSMUSG00000097285ENSMUST00000181737
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004L3_0001ENSDARG00000073813ENSDART00000113596ENSDART00000114347ENSDARG00000078211ENSDART00000108831ENSDART00000154759CIL_0004L3_0002ENSG00000132330ENST00000254663ENST00000409736ENST00000446202ENST00000450965ENST00000480357ENST00000482031ENST00000497951ENSG00000144488ENST00000343063ENST00000409506ENST00000477241ENST00000612395CIL_0004L3_0003ENSMUSG00000026307ENSMUST00000027532ENSMUST00000153621ENSMUSG00000049515ENSMUST00000088904ENSMUST00000176156ENSMUSG00000097285ENSMUST00000181737
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000073813 ENSDART00000113596 N/A N/A N/A 1.049±0.41 N/A N/A 3.664±0.19 1.334±0.07 N/A N/A 0.811±0.00 N/A N/A N/A
ENSDART00000114347 N/A N/A N/A 0.944±0.00 N/A N/A 1.370±0.00 1.604±0.00 0.195±0.00 N/A N/A N/A N/A N/A
ENSDART00000156434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000078211 ENSDART00000108831 N/A N/A N/A 0.489±0.00 N/A N/A 0.165±0.12 0.141±0.00 N/A N/A 0.047±0.00 N/A N/A N/A
ENSDART00000154759 N/A N/A N/A 0.217±0.06 N/A N/A 0.150±0.08 0.145±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132330 ENST00000254663 N/A N/A N/A N/A N/A N/A 2.984±0.00 5.455±2.23 5.719±0.00 N/A N/A 8.158±1.76 N/A N/A
ENST00000409736 N/A N/A 0.824±0.00 1.640±0.00 N/A 1.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446202 N/A N/A N/A N/A N/A N/A N/A N/A 5.287±0.00 N/A N/A N/A N/A N/A
ENST00000450965 N/A N/A N/A N/A N/A N/A N/A N/A 7.024±0.00 N/A N/A 13.628±0.00 N/A N/A
ENST00000463433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.950±0.00 N/A N/A
ENST00000480859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482031 N/A N/A N/A N/A 2.596±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497951 N/A N/A 0.455±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144488 ENST00000343063 N/A N/A N/A N/A N/A N/A N/A 0.422±0.00 N/A N/A N/A 0.266±0.00 N/A N/A
ENST00000409169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409506 0.004±0.00 N/A N/A 0.121±0.00 0.238±0.00 0.195±0.00 0.312±0.00 0.470±0.00 0.156±0.05 0.188±0.00 0.016±0.00 2.141±0.93 0.290±0.00 N/A
ENST00000423032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477241 0.005±0.00 0.113±0.00 N/A N/A N/A 0.038±0.00 0.072±0.00 N/A N/A N/A 0.149±0.00 0.114±0.00 0.072±0.00 0.140±0.00
ENST00000612395 N/A 0.286±0.00 N/A N/A 0.353±0.00 N/A N/A N/A N/A N/A N/A 0.725±0.00 N/A 0.592±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026307 ENSMUST00000027532 6.355±1.06 4.124±2.48 9.975±0.16 4.215±0.75 5.529±2.38 3.945±1.42 4.182±0.44 41.199±6.18 27.281±11.71 8.652±2.84 3.337±0.83 2.837±1.22 13.713±5.73 7.603±3.08
ENSMUST00000123651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153621 0.975±0.00 N/A N/A 0.492±0.00 1.529±0.05 N/A 0.604±0.00 N/A N/A 1.564±0.00 0.434±0.00 1.057±0.23 1.596±0.42 1.312±0.00
ENSMUST00000154045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049515 ENSMUST00000088904 0.020±0.01 0.040±0.00 0.013±0.00 0.050±0.00 0.047±0.02 0.022±0.00 0.025±0.00 0.045±0.03 0.018±0.01 0.059±0.00 0.014±0.00 0.075±0.04 0.057±0.04 0.055±0.02
ENSMUST00000176156 0.019±0.00 0.042±0.03 N/A N/A 0.065±0.03 0.044±0.02 0.009±0.00 0.017±0.00 0.024±0.01 0.014±0.00 0.030±0.00 0.119±0.07 N/A 0.034±0.00
ENSMUSG00000097285 ENSMUST00000181737 N/A N/A 1.120±1.10 0.084±0.01 0.468±0.03 0.272±0.00 N/A 0.244±0.14 0.078±0.04 0.137±0.00 0.124±0.00 0.265±0.17 0.064±0.04 0.117±0.00

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