C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003NI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000258984-ENSG00000132330 CGP 9606 2:237967014-238099413
GeneTranscriptPositionBiotype
ENSG00000132330 (SCLY)
selenocysteine lyase 		ENST00000254663 (SCLY-001) 238060889-238099413 protein_coding
ENST00000409736 (SCLY-003) 238061031-238092083 protein_coding
ENST00000412508 (SCLY-011) 238061054-238098219 protein_coding
ENST00000413463 (SCLY-008) 238061001-238082202 protein_coding
ENST00000416757 (SCLY-013) 238061091-238069836 protein_coding
ENST00000423324 (SCLY-010) 238061043-238083303 nonsense_mediated_decay
ENST00000431487 (SCLY-019) 238069457-238083246 protein_coding
ENST00000433750 (SCLY-017) 238083246-238094849 protein_coding
ENST00000437134 (SCLY-020) 238069464-238099359 protein_coding
ENST00000440143 (SCLY-021) 238082101-238091523 protein_coding
ENST00000443532 (SCLY-012) 238061082-238082221 nonsense_mediated_decay
ENST00000446202 (SCLY-009) 238061020-238081741 nonsense_mediated_decay
ENST00000450965 (SCLY-006) 238081735-238099413 protein_coding
ENST00000463433 (SCLY-018) 238091218-238096186 retained_intron
ENST00000480357 (SCLY-002) 238060928-238099412 retained_intron
ENST00000480859 (SCLY-015) 238061293-238081726 processed_transcript
ENST00000482031 (SCLY-016) 238064360-238083075 retained_intron
ENST00000487197 (SCLY-014) 238061113-238065095 retained_intron
ENST00000497256 (SCLY-007) 238060966-238068231 retained_intron
ENST00000497951 (SCLY-005) 238078565-238091473 retained_intron
ENSG00000184182 (UBE2F)
ubiquitin-conjugating enzyme E2F (putative) 		ENST00000272930 (UBE2F-001) 237966955-238042595 protein_coding
ENST00000409332 (UBE2F-004) 237967082-238041917 protein_coding
ENST00000409633 (UBE2F-011) 237967014-238041545 protein_coding
ENST00000409953 (UBE2F-020) 237967081-238041770 protein_coding
ENST00000414443 (UBE2F-201) 237966955-238042782 protein_coding
ENST00000416292 (UBE2F-010) 237967014-238041293 protein_coding
ENST00000417231 (UBE2F-013) 237967026-238041542 nonsense_mediated_decay
ENST00000433241 (UBE2F-016) 237967080-238041605 nonsense_mediated_decay
ENST00000433568 (UBE2F-008) 237967014-238016630 nonsense_mediated_decay
ENST00000434137 (UBE2F-023) 237973095-238035922 protein_coding
ENST00000434655 (UBE2F-017) 237968793-238041295 protein_coding
ENST00000439338 (UBE2F-019) 237967040-238041415 nonsense_mediated_decay
ENST00000439780 (UBE2F-018) 237967060-238041320 nonsense_mediated_decay
ENST00000440223 (UBE2F-006) 237966827-238032255 nonsense_mediated_decay
ENST00000441728 (UBE2F-007) 237966945-238041886 nonsense_mediated_decay
ENST00000445676 (UBE2F-014) 237967028-238041692 nonsense_mediated_decay
ENST00000448502 (UBE2F-009) 237967014-238030595 protein_coding
ENST00000454786 (UBE2F-002) 237967075-238041739 nonsense_mediated_decay
ENST00000455999 (UBE2F-012) 237967018-238041480 nonsense_mediated_decay
ENST00000472479 (UBE2F-003) 238035129-238041933 retained_intron
ENST00000480828 (UBE2F-021) 238025261-238041783 retained_intron
ENST00000482096 (UBE2F-022) 238025339-238032669 retained_intron
ENST00000612130 (UBE2F-202) 237968793-238042782 protein_coding
ENSG00000251971 (RNU6-1333P)
RNA, U6 small nuclear 1333, pseudogene 		ENST00000516162 (RNU6-1333P-201) 238028971-238029063 snRNA
CIL_0003NI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034343-ENSMUSG00000026307 CGP 10090 1:91250304-91321075
GeneTranscriptPositionBiotype
ENSMUSG00000026307 (Scly)
selenocysteine lyase 		ENSMUST00000027532 (Scly-001) 91298338-91321075 protein_coding
ENSMUST00000123651 (Scly-004) 91298360-91303511 retained_intron
ENSMUST00000124832 (Scly-007) 91298404-91308709 protein_coding
ENSMUST00000137074 (Scly-010) 91302797-91309872 protein_coding
ENSMUST00000142488 (Scly-005) 91298368-91308743 protein_coding
ENSMUST00000142802 (Scly-003) 91298427-91305436 processed_transcript
ENSMUST00000145843 (Scly-009) 91299932-91302869 protein_coding
ENSMUST00000147523 (Scly-008) 91298407-91308815 protein_coding
ENSMUST00000153621 (Scly-002) 91298370-91311330 retained_intron
ENSMUST00000154045 (Scly-006) 91298369-91309851 nonsense_mediated_decay
ENSMUSG00000034343 (Ube2f)
ubiquitin-conjugating enzyme E2F (putative) 		ENSMUST00000059743 (Ube2f-001) 91250311-91285740 protein_coding
ENSMUST00000171112 (Ube2f-004) 91250566-91285927 protein_coding
ENSMUST00000171165 (Ube2f-002) 91250337-91290337 protein_coding
ENSMUST00000178627 (Ube2f-201) 91250319-91286025 protein_coding
ENSMUST00000185697 (Ube2f-005) 91283652-91285016 retained_intron
ENSMUST00000185950 (Ube2f-009) 91276111-91285391 retained_intron
ENSMUST00000187494 (Ube2f-008) 91274964-91276551 retained_intron
ENSMUST00000188576 (Ube2f-007) 91250304-91275479 retained_intron
ENSMUST00000189589 (Ube2f-010) 91264587-91276443 retained_intron
ENSMUST00000191368 (Ube2f-003) 91250365-91285773 protein_coding
ENSMUST00000191533 (Ube2f-006) 91250656-91265237 protein_coding
ENSMUSG00000083064 (Gm7785)
predicted gene 7785 		ENSMUST00000117121 (Gm7785-001) 91296045-91296936 processed_pseudogene
ENSMUSG00000097285 (Gm26683)
predicted gene, 26683 		ENSMUST00000181737 (Gm26683-201) 91297203-91304405 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NI_0001ENSG00000132330ENST00000254663ENST00000409736ENST00000446202ENST00000450965ENST00000480357ENST00000482031ENST00000497951ENSG00000184182ENST00000272930ENST00000409332ENST00000409633ENST00000409953ENST00000417231ENST00000441728ENST00000445676ENST00000455999ENST00000480828ENSG00000251971ENST00000516162CIL_0003NI_0002ENSMUSG00000026307ENSMUST00000027532ENSMUST00000153621ENSMUSG00000034343ENSMUST00000059743ENSMUST00000171112ENSMUST00000171165ENSMUST00000178627ENSMUST00000185950ENSMUST00000188576ENSMUST00000191368ENSMUST00000191533ENSMUSG00000083064ENSMUST00000117121ENSMUSG00000097285ENSMUST00000181737
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132330 ENST00000254663 N/A N/A N/A N/A N/A N/A 2.984±0.00 5.455±2.23 5.719±0.00 N/A N/A 8.158±1.76 N/A N/A
ENST00000409736 N/A N/A 0.824±0.00 1.640±0.00 N/A 1.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446202 N/A N/A N/A N/A N/A N/A N/A N/A 5.287±0.00 N/A N/A N/A N/A N/A
ENST00000450965 N/A N/A N/A N/A N/A N/A N/A N/A 7.024±0.00 N/A N/A 13.628±0.00 N/A N/A
ENST00000463433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.950±0.00 N/A N/A
ENST00000480859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482031 N/A N/A N/A N/A 2.596±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497951 N/A N/A 0.455±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184182 ENST00000272930 6.557±0.00 5.460±0.00 N/A 4.291±0.00 5.421±0.00 2.855±1.83 3.187±0.00 4.504±1.50 3.376±1.07 3.413±1.22 3.259±0.00 5.775±1.16 7.554±0.14 10.867±0.00
ENST00000409332 N/A 7.909±0.00 N/A N/A 9.114±0.00 6.210±0.00 7.541±0.00 7.043±0.00 6.182±0.00 3.651±1.38 4.343±2.54 14.055±0.00 9.780±2.39 14.405±0.02
ENST00000409633 N/A N/A N/A N/A N/A N/A 7.946±0.00 N/A N/A 8.625±0.00 10.567±0.00 N/A 11.573±0.00 N/A
ENST00000409953 N/A N/A N/A N/A 4.629±0.00 6.522±0.00 N/A N/A N/A N/A N/A 9.971±0.10 13.624±2.88 N/A
ENST00000414443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417231 N/A N/A N/A 3.447±0.00 N/A N/A 1.244±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000433241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441728 N/A N/A N/A 10.578±0.00 N/A 6.381±0.00 2.489±1.65 N/A N/A N/A N/A N/A N/A 13.324±0.00
ENST00000445676 11.591±0.00 11.377±0.00 N/A N/A 10.021±0.00 N/A N/A N/A N/A N/A N/A 19.603±0.00 21.461±0.00 20.839±0.00
ENST00000448502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455999 N/A N/A N/A N/A N/A N/A N/A 12.237±0.00 N/A 10.206±0.00 N/A N/A N/A N/A
ENST00000472479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480828 N/A N/A 2.227±0.00 5.075±0.00 N/A 2.492±0.00 1.432±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000482096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251971 ENST00000516162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.232±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026307 ENSMUST00000027532 6.355±1.06 4.124±2.48 9.975±0.16 4.215±0.75 5.529±2.38 3.945±1.42 4.182±0.44 41.199±6.18 27.281±11.71 8.652±2.84 3.337±0.83 2.837±1.22 13.713±5.73 7.603±3.08
ENSMUST00000123651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153621 0.975±0.00 N/A N/A 0.492±0.00 1.529±0.05 N/A 0.604±0.00 N/A N/A 1.564±0.00 0.434±0.00 1.057±0.23 1.596±0.42 1.312±0.00
ENSMUST00000154045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034343 ENSMUST00000059743 N/A 6.158±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171112 N/A 3.355±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.772±0.96
ENSMUST00000171165 2.332±0.59 2.309±0.47 2.878±0.33 2.007±0.10 2.308±0.91 2.309±0.24 1.669±0.15 1.839±0.12 1.808±0.41 2.351±0.16 2.836±0.20 2.228±1.01 1.562±0.35 2.014±0.00
ENSMUST00000178627 15.081±1.43 9.661±2.61 19.803±0.52 13.812±4.28 18.061±4.86 15.602±1.38 15.733±1.80 16.912±0.92 21.138±8.69 12.724±1.17 14.852±1.81 12.017±2.68 29.480±5.97 26.109±10.37
ENSMUST00000185697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.445±0.00
ENSMUST00000187494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.011±0.00 N/A N/A
ENSMUST00000189589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191368 5.200±0.00 N/A 11.054±0.00 N/A 7.585±0.00 N/A 4.381±0.00 N/A 11.038±3.87 N/A 5.511±0.67 5.362±0.25 10.039±2.11 11.666±3.72
ENSMUST00000191533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 59.872±10.64
ENSMUSG00000083064 ENSMUST00000117121 0.296±0.00 N/A 0.199±0.06 0.454±0.21 0.239±0.16 0.651±0.30 0.111±0.06 0.156±0.09 0.276±0.07 0.183±0.14 0.160±0.08 0.377±0.19 0.267±0.11 0.598±0.70
ENSMUSG00000097285 ENSMUST00000181737 N/A N/A 1.120±1.10 0.084±0.01 0.468±0.03 0.272±0.00 N/A 0.244±0.14 0.078±0.04 0.137±0.00 0.124±0.00 0.265±0.17 0.064±0.04 0.117±0.00

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