C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin IX
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137663 Syt9-003 ENSMUSG00000062542 10090 + 7:107370728-107436336 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLungOvaryENSMUST00000137663
Transcript ID Adrenal Breast Colon Heart Lung Ovary
ENSMUST00000137663 0.965±0.38 0.220±0.13 0.267±0.00 0.140±0.00 0.258±0.00 0.400±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HA CIL_0007HA_0002 CGP 7:107209445-107548656
CIL_0001FU CIL_0001FU_0003 CGP 7:107370728-107591094

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0031045 IDA dense core granule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318881 SYT9-001 protein_coding Homo_sapiens 0 411
ENST00000532592 SYT9-002 nonsense_mediated_decay Homo_sapiens 0 283

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