C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001FU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029239-ENSDARG00000062494 CGP 7955 25:16198726-16295154
GeneTranscriptPositionBiotype
ENSDARG00000029239 (syt9b)
synaptotagmin IXb 		ENSDART00000049992 (syt9b-001) 16198726-16262959 protein_coding
ENSDARG00000062494 (BX294190.1)
Uncharacterized protein 		ENSDART00000090436 (BX294190.1-201) 16290804-16295154 protein_coding
CIL_0001FU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170743-ENSG00000183801 CGP 9606 11:7238778-7511377
GeneTranscriptPositionBiotype
ENSG00000170743 (SYT9)
synaptotagmin IX 		ENST00000318881 (SYT9-001) 7251950-7469042 protein_coding
ENST00000524820 (SYT9-003) 7238778-7444547 nonsense_mediated_decay
ENST00000532592 (SYT9-002) 7252170-7469037 nonsense_mediated_decay
ENSG00000183801 (OLFML1)
olfactomedin-like 1 		ENST00000329293 (OLFML1-001) 7485482-7511377 protein_coding
ENST00000528308 (OLFML1-002) 7485526-7488965 retained_intron
ENST00000528758 (OLFML1-004) 7485606-7510412 protein_coding
ENST00000530135 (OLFML1-003) 7485388-7510349 protein_coding
ENST00000534244 (OLFML1-005) 7485506-7488206 protein_coding
ENSG00000251364 (CTD-2516F10.2)
 ENST00000504206 (CTD-2516F10.2-002) 7437627-7461344 antisense
ENST00000514126 (CTD-2516F10.2-009) 7427266-7440525 antisense
ENST00000525534 (CTD-2516F10.2-011) 7435828-7440692 antisense
ENST00000526695 (CTD-2516F10.2-007) 7441415-7465830 antisense
ENST00000526706 (CTD-2516F10.2-006) 7450377-7465835 antisense
ENST00000530169 (CTD-2516F10.2-008) 7427946-7465822 antisense
ENST00000530201 (CTD-2516F10.2-003) 7469687-7512515 antisense
ENST00000530846 (CTD-2516F10.2-010) 7427587-7435630 antisense
ENST00000533684 (CTD-2516F10.2-005) 7457032-7465774 antisense
ENST00000533693 (CTD-2516F10.2-004) 7435723-7465790 antisense
ENST00000622955 (CTD-2516F10.2-012) 7427266-7504872 antisense
CIL_0001FU_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062542-ENSMUSG00000051041 CGP 10090 7:107370728-107591094
GeneTranscriptPositionBiotype
ENSMUSG00000051041 (Olfml1)
olfactomedin-like 1 		ENSMUST00000120990 (Olfml1-001) 107567446-107591094 protein_coding
ENSMUSG00000062542 (Syt9)
synaptotagmin IX 		ENSMUST00000073459 (Syt9-001) 107370790-107548656 protein_coding
ENSMUST00000127444 (Syt9-005) 107504096-107548653 retained_intron
ENSMUST00000130414 (Syt9-002) 107370790-107548653 nonsense_mediated_decay
ENSMUST00000137663 (Syt9-003) 107370728-107436336 protein_coding
ENSMUST00000144003 (Syt9-004) 107504062-107548653 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FU_0001ENSDARG00000029239ENSDART00000049992ENSDARG00000062494ENSDART00000090436CIL_0001FU_0002ENSG00000170743ENST00000318881ENST00000524820ENST00000532592ENSG00000183801ENST00000329293ENST00000528308ENST00000528758ENST00000530135ENST00000534244ENSG00000251364ENST00000504206ENST00000514126ENST00000525534ENST00000526695ENST00000526706ENST00000530169ENST00000530201ENST00000530846ENST00000533684ENST00000533693ENST00000622955CIL_0001FU_0003ENSMUSG00000051041ENSMUST00000120990ENSMUSG00000062542ENSMUST00000073459ENSMUST00000127444ENSMUST00000130414ENSMUST00000137663ENSMUST00000144003
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FU_0001ENSDARG00000029239ENSDART00000049992ENSDARG00000062494ENSDART00000090436CIL_0001FU_0002ENSG00000170743ENST00000318881ENST00000524820ENST00000532592ENSG00000183801ENST00000329293ENST00000528308ENST00000528758ENST00000530135ENST00000534244ENSG00000251364ENST00000504206ENST00000514126ENST00000525534ENST00000526695ENST00000530201ENST00000533684ENST00000533693ENST00000622955CIL_0001FU_0003ENSMUSG00000051041ENSMUST00000120990ENSMUSG00000062542ENSMUST00000073459ENSMUST00000127444ENSMUST00000130414ENSMUST00000137663ENSMUST00000144003
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029239 ENSDART00000049992 N/A N/A N/A 8.078±4.14 N/A N/A 0.454±0.30 3.249±2.03 0.052±0.00 N/A 0.343±0.00 N/A N/A N/A
ENSDARG00000062494 ENSDART00000090436 N/A N/A N/A 0.281±0.16 N/A N/A 1.114±0.72 0.660±0.54 N/A N/A 0.848±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170743 ENST00000318881 0.033±0.00 N/A N/A 2.469±2.16 N/A N/A N/A 0.340±0.00 1.343±0.00 N/A N/A N/A 0.066±0.03 0.425±0.00
ENST00000524820 N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A 0.106±0.00 0.044±0.00 N/A
ENST00000532592 N/A N/A N/A 0.976±0.00 N/A 0.099±0.00 0.092±0.01 0.585±0.06 0.313±0.16 N/A 0.316±0.00 0.107±0.02 N/A N/A
ENSG00000183801 ENST00000329293 2.953±0.00 6.360±0.00 N/A 0.204±0.00 4.231±2.58 1.778±0.00 0.986±0.23 1.546±0.00 1.595±0.77 4.296±3.58 0.839±0.00 8.796±7.17 3.021±1.50 4.856±2.61
ENST00000528308 N/A N/A 0.330±0.00 N/A N/A N/A 0.275±0.00 0.147±0.00 N/A N/A N/A N/A N/A N/A
ENST00000528758 1.185±0.00 N/A N/A 0.073±0.00 N/A 0.679±0.29 N/A N/A N/A N/A N/A N/A N/A 3.471±0.00
ENST00000530135 N/A N/A N/A 0.076±0.00 N/A 1.337±0.83 0.230±0.00 0.575±0.10 1.265±0.00 N/A 0.271±0.04 2.453±2.46 2.560±0.00 N/A
ENST00000534244 N/A N/A 0.585±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251364 ENST00000504206 0.029±0.00 N/A N/A 0.275±0.00 N/A 0.023±0.00 N/A 0.190±0.00 0.080±0.00 0.188±0.00 N/A 0.039±0.02 0.050±0.01 0.260±0.00
ENST00000514126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.167±0.00 N/A N/A
ENST00000525534 N/A 0.924±0.00 N/A N/A N/A N/A N/A 1.540±0.00 N/A 0.666±0.00 N/A 0.163±0.00 N/A N/A
ENST00000526695 0.210±0.00 N/A N/A N/A N/A 0.217±0.00 N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A
ENST00000526706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530201 N/A N/A N/A N/A N/A N/A 0.653±0.00 N/A 0.539±0.00 N/A N/A 0.295±0.00 N/A N/A
ENST00000530846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.04 N/A N/A
ENST00000533693 0.336±0.00 N/A N/A N/A 0.724±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622955 N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A 0.074±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000051041 ENSMUST00000120990 14.441±6.03 3.211±0.87 5.788±3.05 3.762±4.79 7.776±2.09 1.721±0.49 1.797±0.65 4.937±1.81 2.191±2.16 4.741±1.59 0.467±0.16 4.427±1.93 3.741±4.25 0.324±0.05
ENSMUSG00000062542 ENSMUST00000073459 0.332±0.00 0.482±0.19 0.091±0.02 2.824±0.96 0.141±0.09 0.211±0.09 0.032±0.01 0.464±0.08 0.198±0.12 0.115±0.03 0.175±0.10 0.417±0.19 0.294±0.12 0.517±0.23
ENSMUST00000127444 0.012±0.00 N/A N/A N/A 0.198±0.00 0.160±0.00 N/A 0.278±0.00 0.032±0.00 N/A 0.037±0.00 0.307±0.05 0.122±0.00 0.312±0.07
ENSMUST00000130414 N/A 0.457±0.21 N/A N/A 0.053±0.00 0.195±0.09 0.008±0.00 0.216±0.08 0.048±0.00 0.143±0.10 0.062±0.02 0.259±0.05 0.049±0.00 N/A
ENSMUST00000137663 N/A 0.965±0.38 N/A N/A 0.220±0.13 0.267±0.00 0.140±0.00 N/A N/A 0.258±0.00 N/A 0.400±0.09 N/A N/A
ENSMUST00000144003 N/A N/A N/A N/A 0.094±0.03 N/A N/A N/A 0.039±0.00 N/A 0.199±0.00 0.144±0.00 0.145±0.06 0.410±0.15

Loading