C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transient receptor potential cation channel, subfamily M, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138609 Trpm1-015 ENSMUSG00000030523 10090 + 7:64226948-64231280 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyLungOvaryENSMUST00000138609
Transcript ID Adipose Kidney Lung Ovary
ENSMUST00000138609 0.157±0.00 0.729±0.00 0.234±0.13 0.276±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081G CIL_00081G_0002 VISTA 7:63656077-64260826

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256552 TRPM1-004 protein_coding Homo_sapiens 0 353
ENST00000397795 TRPM1-001 protein_coding Homo_sapiens 0 353
ENST00000542188 TRPM1-201 protein_coding Homo_sapiens 0 353
ENST00000558445 TRPM1-008 protein_coding Homo_sapiens 0 353
ENST00000558768 TRPM1-007 protein_coding Homo_sapiens 0 353
ENST00000560801 TRPM1-006 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000611448 TRPM1-202 protein_coding Homo_sapiens 0 353
ENST00000615583 TRPM1-203 protein_coding Homo_sapiens 0 353
ENST00000617515 TRPM1-204 protein_coding Homo_sapiens 0 353
ENST00000618210 TRPM1-205 protein_coding Homo_sapiens 0 353
ENST00000621076 TRPM1-206 protein_coding Homo_sapiens 0 353

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