C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: hemicentin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138821 Hmcn2-003 ENSMUSG00000055632 10090 + 2:31438062-31460724 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMuscleOvaryPlacentaENSMUST00000138821
Transcript ID Kidney Muscle Ovary Placenta
ENSMUST00000138821 2.855±0.73 4.284±0.96 3.711±0.00 1.294±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000936 CIL_000936_0002 VISTA 2:31199311-31800827
CIL_0004XH CIL_0004XH_0002 CGP 2:31245823-31460738
CIL_0005UI CIL_0005UI_0002 CGP 2:31314415-31520672

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000623487 HMCN2-005 retained_intron Homo_sapiens 0 361
ENST00000624552 HMCN2-001 protein_coding Homo_sapiens 0 1982

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