C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: hemicentin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000623487 HMCN2-005 ENSG00000148357 9606 + 9:130429166-130434121 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryENST00000623487
Transcript ID Kidney Liver Ovary
ENST00000623487 0.152±0.00 0.089±0.00 0.292±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XH CIL_0004XH_0001 CGP 9:130172578-130434123
CIL_000936 CIL_000936_0001 VISTA 9:130178260-130779710
CIL_0005UI CIL_0005UI_0001 CGP 9:130265882-130501274

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142448 Hmcn2-004 processed_transcript Mus_musculus 0 361
ENSMUST00000138821 Hmcn2-003 retained_intron Mus_musculus 0 361
ENSMUST00000113532 Hmcn2-001 protein_coding Mus_musculus 0 361

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