C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138859 Usp8-003 ENSMUSG00000027363 10090 + 2:126707328-126759248 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000138859
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000138859 8.416±1.80 11.986±2.09 3.400±0.37 6.164±1.50 5.255±0.55 2.695±0.52 9.889±1.37 4.368±1.70 10.559±2.48 12.922±3.11 2.533±0.90 8.477±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070V CIL_00070V_0002 CGP 2:126627442-126759297
CIL_0002E8 CIL_0002E8_0002 CGP 2:126707328-126783458

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307179 USP8-003 protein_coding Homo_sapiens 0 1698
ENST00000396444 USP8-001 protein_coding Homo_sapiens 0 1698
ENST00000413336 AC105402.3-001 processed_pseudogene Homo_sapiens 2e-33 147
ENST00000415606 USP8P1-001 processed_pseudogene Homo_sapiens 0 1380
ENST00000419830 USP8-007 retained_intron Homo_sapiens 0 1042
ENST00000425032 USP8-002 protein_coding Homo_sapiens 0 1792
ENST00000430926 USP8P1-001 processed_pseudogene Homo_sapiens 0 1380
ENST00000438377 USP8P1-001 processed_pseudogene Homo_sapiens 0 1380
ENST00000445362 USP8P1-001 processed_pseudogene Homo_sapiens 0 1380
ENST00000454254 USP8P1-001 processed_pseudogene Homo_sapiens 0 1380
ENST00000484424 USP8P1-001 processed_pseudogene Homo_sapiens 0 1369
ENST00000494673 USP8P1-001 processed_pseudogene Homo_sapiens 0 1408
ENST00000558091 USP8-017 protein_coding Homo_sapiens 0 527
ENST00000558892 USP8-018 processed_transcript Homo_sapiens 0 353
ENST00000559242 USP8-013 nonsense_mediated_decay Homo_sapiens 4e-38 161
ENST00000559329 USP8-004 non_stop_decay Homo_sapiens 0 894
ENST00000560297 USP8-008 protein_coding Homo_sapiens 0 407
ENST00000560379 USP8-016 retained_intron Homo_sapiens 0 390
ENST00000560527 USP8-014 processed_transcript Homo_sapiens 0 425
ENST00000560730 USP8-005 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000560954 USP8-009 processed_transcript Homo_sapiens 0 396
ENST00000560982 USP8-011 protein_coding Homo_sapiens 0 303
ENST00000561211 USP8-012 nonsense_mediated_decay Homo_sapiens 6e-38 161
ENST00000561330 USP8-006 nonsense_mediated_decay Homo_sapiens 0 468

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