C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396444 USP8-001 ENSG00000138592 9606 + 15:50424382-50514419 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000396444
Transcript ID Bladder Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000396444 0.206±0.00 0.442±0.13 0.353±0.00 0.341±0.00 0.285±0.00 0.033±0.00 0.324±0.07 0.206±0.00 0.794±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070V CIL_00070V_0001 CGP 15:50275392-50514419
CIL_0002E8 CIL_0002E8_0001 CGP 15:50424380-50546708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000281 IMP mitotic cytokinesis
GO:0001669 IEA acrosomal vesicle
GO:0004197 TAS cysteine-type endopeptidase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005769 IDA early endosome
GO:0005829 IDA cytosol
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007032 IMP endosome organization
GO:0007265 IEA Ras protein signal transduction
GO:0008283 TAS cell proliferation
GO:0016579 IMP protein deubiquitination
GO:0017124 IEA SH3 domain binding
GO:0019897 IDA extrinsic component of plasma membrane
GO:0030496 IDA midbody
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0070536 IDA protein K63-linked deubiquitination
GO:0071108 IDA protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110416 Usp8-002 protein_coding Mus_musculus 0 1698
ENSMUST00000028841 Usp8-001 protein_coding Mus_musculus 0 1698
ENSMUST00000138859 Usp8-003 processed_transcript Mus_musculus 0 1698
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000001 73

Loading