C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307179 USP8-003 ENSG00000138592 9606 + 15:50424382-50499776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307179
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307179 4.193±0.00 6.045±0.00 1.979±0.00 3.966±0.05 3.928±1.16 4.922±0.02 2.576±1.32 5.330±2.49 3.336±0.11 3.554±0.06 1.373±1.19 6.836±4.31 8.689±6.83 23.684±10.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070V CIL_00070V_0001 CGP 15:50275392-50514419
CIL_0002E8 CIL_0002E8_0001 CGP 15:50424380-50546708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000281 IMP mitotic cytokinesis
GO:0004197 TAS cysteine-type endopeptidase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005769 IDA early endosome
GO:0005829 IDA cytosol
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007032 IMP endosome organization
GO:0008283 TAS cell proliferation
GO:0016579 IMP protein deubiquitination
GO:0017124 IEA SH3 domain binding
GO:0019897 IDA extrinsic component of plasma membrane
GO:0030496 IDA midbody
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0070536 IDA protein K63-linked deubiquitination
GO:0071108 IDA protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110416 Usp8-002 protein_coding Mus_musculus 0 1698
ENSMUST00000028841 Usp8-001 protein_coding Mus_musculus 0 1698
ENSMUST00000138859 Usp8-003 processed_transcript Mus_musculus 0 1698

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