C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidic acid phosphatase type 2 domain containing 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139120 Ppapdc1b-006 ENSMUSG00000031570 10090 + 8:25720382-25724883 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000139120
Transcript ID Adipose Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000139120 5.474±0.21 2.822±0.00 1.831±0.96 3.385±0.73 1.299±0.00 7.222±0.00 0.660±0.15 1.945±0.31 4.915±2.21 1.053±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H7 CIL_0008H7_0002 VISTA 8:25139932-25741457
CIL_0008SM CIL_0008SM_0002 VISTA 8:25140188-25742103
CIL_0008NR CIL_0008NR_0002 VISTA 8:25243011-25845762

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000419686 PPAPDC1B-003 protein_coding Homo_sapiens 0 331
ENST00000422581 PPAPDC1B-002 protein_coding Homo_sapiens 0 318
ENST00000424479 PPAPDC1B-001 protein_coding Homo_sapiens 0 390
ENST00000524616 PPAPDC1B-007 protein_coding Homo_sapiens 0 390
ENST00000527793 PPAPDC1B-014 processed_transcript Homo_sapiens 0 257
ENST00000528814 PPAPDC1B-004 retained_intron Homo_sapiens 0 259
ENST00000529359 PPAPDC1B-005 protein_coding Homo_sapiens 0 390
ENST00000530193 PPAPDC1B-013 processed_transcript Homo_sapiens 0 263
ENST00000530432 PPAPDC1B-012 retained_intron Homo_sapiens 0 396
ENST00000531109 PPAPDC1B-016 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000531483 PPAPDC1B-009 processed_transcript Homo_sapiens 5.00264e-43 178
ENST00000531823 PPAPDC1B-015 protein_coding Homo_sapiens 0 390
ENST00000534339 PPAPDC1B-006 protein_coding Homo_sapiens 0 320

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