C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptopodin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139160 Synpo2-003 ENSMUSG00000050315 10090 - 3:123076519-123112810 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderLiverLungOvaryPlacentaTestisENSMUST00000139160
Transcript ID Adipose Bladder Liver Lung Ovary Placenta Testis
ENSMUST00000139160 11.267±0.00 33.362±0.01 0.018±0.01 2.174±0.00 2.256±0.81 0.648±0.72 0.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005O CIL_00005O_0003 CGP 3:123006206-123236149
CIL_0005EP CIL_0005EP_0002 CGP 3:123076519-123365635

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307142 SYNPO2-001 protein_coding Homo_sapiens 2e-27 130
ENST00000429713 SYNPO2-003 protein_coding Homo_sapiens 2e-27 130
ENST00000434046 SYNPO2-002 protein_coding Homo_sapiens 1e-27 130
ENST00000504178 SYNPO2-004 protein_coding Homo_sapiens 2e-27 130
ENST00000610556 SYNPO2-202 protein_coding Homo_sapiens 2e-27 130

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