| Transcript ID | Brain | Heart | Liver | Muscle |
|---|---|---|---|---|
| ENST00000434046 | 2.636±0.00 | 14.188±1.43 | 0.407±0.00 | 170.708±157.91 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | synaptopodin 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000434046  |
SYNPO2-002 |
ENSG00000172403 |
9606 | + |
4:118889037-119037383  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | IEA | actin binding |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | ISS | nucleus |
| GO:0005925 | IDA | focal adhesion |
| GO:0015629 | IDA | actin cytoskeleton |
| GO:0030018 | ISS | Z disc |
| GO:0051371 | ISS | muscle alpha-actinin binding |
| GO:0071889 | ISS | 14-3-3 protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000051443
|
Synpo2-001 | protein_coding | Mus_musculus | 0 | 2826 |
|
ENSMUST00000106426
|
Synpo2-005 | protein_coding | Mus_musculus | 0 | 2824 |
|
ENSMUST00000106427
|
Synpo2-004 | protein_coding | Mus_musculus | 0 | 2658 |
|
ENSMUST00000184590
|
Synpo2-006 | processed_transcript | Mus_musculus | 0 | 551 |
|
ENSMUST00000184403
|
Synpo2-002 | processed_transcript | Mus_musculus | 4e-32 | 145 |
|
ENSMUST00000139160
|
Synpo2-003 | protein_coding | Mus_musculus | 1e-27 | 130 |
