C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rap guanine nucleotide exchange factor (GEF)-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139889 Rapgefl1-002 ENSMUSG00000038020 10090 + 11:98850332-98852999 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000139889
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000139889 0.740±0.26 0.442±0.21 12.797±0.38 6.404±0.18 2.115±0.63 27.587±8.06 0.422±0.09 1.013±0.40 0.325±0.15 2.967±2.04 0.063±0.03 2.732±1.08 0.136±0.04 0.452±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430
CIL_0002GI CIL_0002GI_0002 CGP 11:98804905-98853697
CIL_0002GJ CIL_0002GJ_0002 CGP 11:98836785-98905040

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264644 RAPGEFL1-007 protein_coding Homo_sapiens 0 213
ENST00000620260 RAPGEFL1-201 protein_coding Homo_sapiens 0 213

Loading