C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rap guanine nucleotide exchange factor (GEF)-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264644 RAPGEFL1-007 ENSG00000108352 9606 + 17:40177095-40195656 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryPlacentaENST00000264644
Transcript ID Heart Ovary Placenta
ENST00000264644 0.064±0.01 1.945±1.36 0.138±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0001 VISTA 17:39768583-40372873
CIL_0002GI CIL_0002GI_0001 CGP 17:40140318-40195656
CIL_0002GJ CIL_0002GJ_0001 CGP 17:40177010-40284136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005057 IEA receptor signaling protein activity
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007399 TAS nervous system development
GO:0016020 TAS membrane
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107479 Rapgefl1-001 protein_coding Mus_musculus 0 1857
ENSMUST00000139889 Rapgefl1-002 retained_intron Mus_musculus 0 213

Loading