C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal recognition particle 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140279 Srp19-002 ENSMUSG00000014504 10090 + 18:34331145-34336551 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000140279
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000140279 1.176±0.60 2.237±0.72 3.034±0.46 2.023±1.14 1.297±0.22 1.611±0.28 0.950±0.12 0.733±0.15 2.158±1.18 1.938±0.31 0.671±0.00 1.927±0.62 1.428±0.79 0.994±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UN CIL_0004UN_0002 CGP 18:34330847-34373415

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282999 SRP19-002 protein_coding Homo_sapiens 9.99967e-42 174
ENST00000445150 SRP19-005 protein_coding Homo_sapiens 9.99967e-42 174
ENST00000503445 CTC-487M23.8-002 processed_transcript Homo_sapiens 6.00036e-42 174
ENST00000505459 SRP19-001 protein_coding Homo_sapiens 4.00001e-41 174
ENST00000506997 CTC-487M23.8-001 nonsense_mediated_decay Homo_sapiens 8.00001e-41 172
ENST00000512790 CTC-487M23.8-004 processed_transcript Homo_sapiens 1.99993e-41 174
ENST00000515463 SRP19-008 protein_coding Homo_sapiens 0.0000000000007 79
ENST00000515755 SRP19-003 retained_intron Homo_sapiens 8.00001e-42 174
ENST00000621420 SRP19-201 protein_coding Homo_sapiens 7.00005e-41 172

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