C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate decarboxylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140478 Gad1-006 ENSMUSG00000070880 10090 + 2:70566377-70602012 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000140478
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000140478 0.011±0.00 0.276±0.11 0.015±0.01 14.642±2.21 0.092±0.06 0.058±0.00 0.037±0.02 0.092±0.04 0.042±0.04 0.053±0.03 0.021±0.02 0.053±0.03 0.037±0.02 0.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SB CIL_0003SB_0003 CGP 2:70508819-70602014

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267085 CSAD-004 protein_coding Homo_sapiens 0.00005 55
ENST00000344257 GAD1-002 protein_coding Homo_sapiens 0 747
ENST00000358196 GAD1-001 protein_coding Homo_sapiens 0 3125
ENST00000375272 GAD1-201 protein_coding Homo_sapiens 0 747
ENST00000379846 CSAD-002 protein_coding Homo_sapiens 0.00004 55
ENST00000379850 CSAD-003 protein_coding Homo_sapiens 0.00004 55
ENST00000414527 GAD1-013 nonsense_mediated_decay Homo_sapiens 0 1465
ENST00000429023 GAD1-004 processed_transcript Homo_sapiens 0 747
ENST00000444623 CSAD-017 protein_coding Homo_sapiens 0.00004 55
ENST00000453446 CSAD-019 protein_coding Homo_sapiens 0.00003 55
ENST00000454603 GAD1-007 protein_coding Homo_sapiens 0 233
ENST00000455008 GAD1-009 protein_coding Homo_sapiens 0 346
ENST00000456864 GAD1-010 protein_coding Homo_sapiens 0 363
ENST00000462739 GAD1-014 retained_intron Homo_sapiens 3e-40 169
ENST00000478562 GAD1-006 retained_intron Homo_sapiens 0 1502
ENST00000485013 GAD1-011 retained_intron Homo_sapiens 0 289
ENST00000486850 GAD1-015 protein_coding Homo_sapiens 0 298
ENST00000488724 GAD1-005 retained_intron Homo_sapiens 0 1116
ENST00000490589 CSAD-015 retained_intron Homo_sapiens 0.00001 55
ENST00000490923 CSAD-014 retained_intron Homo_sapiens 0.00002 55
ENST00000493270 GAD1-012 retained_intron Homo_sapiens 0 412
ENST00000493875 GAD1-003 nonsense_mediated_decay Homo_sapiens 0 1714
ENST00000548698 CSAD-020 protein_coding Homo_sapiens 0.000008 55

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