C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAR (HIV) RNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141266 Tarbp2-005 ENSMUSG00000023051 10090 + 15:102518246-102520980 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0002 VISTA 15:102394217-102994945

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266987 TARBP2-001 protein_coding Homo_sapiens 0 809
ENST00000394357 TARBP2-009 protein_coding Homo_sapiens 0 453
ENST00000456234 TARBP2-006 protein_coding Homo_sapiens 0 446
ENST00000546889 TARBP2-003 retained_intron Homo_sapiens 0 510
ENST00000547064 TARBP2-015 nonsense_mediated_decay Homo_sapiens 5.60519e-45 185
ENST00000547388 TARBP2-010 retained_intron Homo_sapiens 0 265
ENST00000548971 TARBP2-005 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000549028 TARBP2-020 processed_transcript Homo_sapiens 0 486
ENST00000549572 TARBP2-007 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000549610 TARBP2-002 retained_intron Homo_sapiens 0 689
ENST00000549679 TARBP2-008 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000550147 TARBP2-004 nonsense_mediated_decay Homo_sapiens 0 809
ENST00000550407 TARBP2-016 protein_coding Homo_sapiens 0 394
ENST00000551157 TARBP2-017 retained_intron Homo_sapiens 7.9874e-44 182
ENST00000551741 TARBP2-022 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000552650 TARBP2-012 retained_intron Homo_sapiens 0 691
ENST00000552817 TARBP2-011 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000552857 TARBP2-021 protein_coding Homo_sapiens 0 281

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