C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAR (HIV-1) RNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547388 TARBP2-010 ENSG00000139546 9606 + 12:53501332-53503472 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0001 VISTA 12:53396852-53997557

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150393 Tarbp2-007 protein_coding Mus_musculus 0 364
ENSMUST00000141266 Tarbp2-005 retained_intron Mus_musculus 0 265
ENSMUST00000142194 Tarbp2-012 protein_coding Mus_musculus 2.8026e-45 185
ENSMUST00000146756 Tarbp2-013 protein_coding Mus_musculus 2.8026e-45 185
ENSMUST00000154948 Tarbp2-010 processed_transcript Mus_musculus 2.8026e-45 185
ENSMUST00000023813 Tarbp2-001 protein_coding Mus_musculus 2.8026e-45 185
ENSMUST00000136968 Tarbp2-004 retained_intron Mus_musculus 2.8026e-45 185
ENSMUST00000100168 Tarbp2-003 protein_coding Mus_musculus 2.8026e-45 185
ENSMUST00000131184 Tarbp2-002 nonsense_mediated_decay Mus_musculus 2.8026e-45 185
ENSMUST00000154451 Tarbp2-006 retained_intron Mus_musculus 3e-36 156

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