C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | CCR4-NOT transcription complex, subunit 6-like | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000141383  |
Cnot6l-008 |
ENSMUSG00000034724 |
10090 | - |
5:96131061-96161871  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00069Y | CIL_00069Y_0002 | CGP | 5:95956928-96164171 |
| CIL_0007HW | CIL_0007HW_0003 | CGP | 5:96070333-96266727 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000288 | IMP | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
| GO:0004535 | IMP | poly(A)-specific ribonuclease activity |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0008284 | IMP | positive regulation of cell proliferation |
| GO:0061157 | IMP | mRNA destabilization |
| GO:0090503 | IMP | RNA phosphodiester bond hydrolysis, exonucleolytic |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000147121
|
cnot6l-002 | processed_transcript | Danio_rerio | 5e-36 | 154 |
|
ENSDART00000076807
|
cnot6l-001 | protein_coding | Danio_rerio | 5e-36 | 154 |
|
ENST00000504123
|
CNOT6L-001 | protein_coding | Homo_sapiens | 0 | 508 |
|
ENST00000504804
|
CNOT6L-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 483 |
|
ENST00000506166
|
CNOT6L-003 | processed_transcript | Homo_sapiens | 0 | 508 |
|
ENST00000512485
|
CNOT6L-005 | protein_coding | Homo_sapiens | 0 | 508 |
|
ENST00000515441
|
CNOT6L-006 | protein_coding | Homo_sapiens | 0 | 508 |
|
ENST00000515506
|
CNOT6L-004 | protein_coding | Homo_sapiens | 0 | 508 |
|
ENST00000559681
|
CNOT6LP1-001 | processed_pseudogene | Homo_sapiens | 0 | 202 |
