C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCR4-NOT transcription complex, subunit 6-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515506 CNOT6L-004 ENSG00000138767 9606 - 4:77718021-77819063 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverOvaryPlacentaTestisENST00000515506
Transcript ID Breast Liver Ovary Placenta Testis
ENST00000515506 1.324±0.00 1.293±0.90 1.379±0.00 1.624±0.76 2.813±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069Y CIL_00069Y_0001 CGP 4:77511753-77819615
CIL_0007HW CIL_0007HW_0002 CGP 4:77713387-77952790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122003 Cnot6l-003 protein_coding Mus_musculus 0 2852
ENSMUST00000155901 Cnot6l-001 protein_coding Mus_musculus 0 2109
ENSMUST00000113005 Cnot6l-201 protein_coding Mus_musculus 0 2106
ENSMUST00000036646 Cnot6l-002 nonsense_mediated_decay Mus_musculus 0 2080
ENSMUST00000152490 Cnot6l-005 retained_intron Mus_musculus 0 773
ENSMUST00000129646 Cnot6l-007 protein_coding Mus_musculus 0 641
ENSDART00000076807 cnot6l-001 protein_coding Danio_rerio 0 640
ENSMUST00000141383 Cnot6l-008 protein_coding Mus_musculus 0 508
ENSMUST00000137207 Cnot6l-006 protein_coding Mus_musculus 0 440
ENSMUST00000154500 Cnot6l-004 protein_coding Mus_musculus 0 265
ENSMUST00000137066 Cnot6l-009 retained_intron Mus_musculus 0 263
ENSDART00000147121 cnot6l-002 processed_transcript Danio_rerio 9e-39 167

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