C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCR4-NOT transcription complex, subunit 6-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000512485 CNOT6L-005 ENSG00000138767 9606 - 4:77720230-77819615 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyMuscleENST00000512485
Transcript ID Bladder Brain Breast Heart Kidney Muscle
ENST00000512485 2.801±0.00 1.964±0.00 3.071±0.00 1.275±0.00 3.481±0.00 2.750±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069Y CIL_00069Y_0001 CGP 4:77511753-77819615
CIL_0007HW CIL_0007HW_0002 CGP 4:77713387-77952790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155901 Cnot6l-001 protein_coding Mus_musculus 0 3044
ENSMUST00000113005 Cnot6l-201 protein_coding Mus_musculus 0 3013
ENSMUST00000036646 Cnot6l-002 nonsense_mediated_decay Mus_musculus 0 2987
ENSMUST00000122003 Cnot6l-003 protein_coding Mus_musculus 0 2108
ENSMUST00000152490 Cnot6l-005 retained_intron Mus_musculus 0 1585
ENSDART00000076807 cnot6l-001 protein_coding Danio_rerio 0 791
ENSMUST00000129646 Cnot6l-007 protein_coding Mus_musculus 0 641
ENSMUST00000141383 Cnot6l-008 protein_coding Mus_musculus 0 508
ENSMUST00000137207 Cnot6l-006 protein_coding Mus_musculus 0 440
ENSMUST00000154500 Cnot6l-004 protein_coding Mus_musculus 0 268
ENSMUST00000137066 Cnot6l-009 retained_intron Mus_musculus 0 263
ENSDART00000147121 cnot6l-002 processed_transcript Danio_rerio 3.00004e-41 174

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