C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phenylalanyl-tRNA synthetase, alpha subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141480 Farsa-006 ENSMUSG00000003808 10090 + 8:84867563-84869010 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000141480
Transcript ID Placenta
ENSMUST00000141480 18.791±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZV CIL_0007ZV_0002 VISTA 8:84428902-85032705
CIL_0007VV CIL_0007VV_0002 VISTA 8:84441926-85045230
CIL_0006LV CIL_0006LV_0002 CGP 8:84856989-84888221

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314606 FARSA-001 protein_coding Homo_sapiens 0 252
ENST00000423140 FARSA-002 protein_coding Homo_sapiens 0 252
ENST00000586146 FARSA-004 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000588025 FARSA-006 protein_coding Homo_sapiens 0 252
ENST00000588965 FARSA-003 retained_intron Homo_sapiens 0 252

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