C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: itchy, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142147 Itch-003 ENSMUSG00000027598 10090 + 2:155133531-155202710 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000142147
Transcript ID Brain Ovary Placenta
ENSMUST00000142147 7.774±0.00 11.007±0.00 9.395±4.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0002 VISTA 2:154750090-155352094
CIL_0003SW CIL_0003SW_0002 CGP 2:155059310-155226855
CIL_0005BA CIL_0005BA_0002 CGP 2:155133509-155250277

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262650 ITCH-002 protein_coding Homo_sapiens 0 1269
ENST00000374864 ITCH-001 protein_coding Homo_sapiens 0 2067
ENST00000483727 ITCH-005 processed_transcript Homo_sapiens 0 625
ENST00000486883 ITCH-003 processed_transcript Homo_sapiens 0 732
ENST00000535650 ITCH-201 protein_coding Homo_sapiens 0 1598
ENST00000610336 ITCH-202 protein_coding Homo_sapiens 0 1910
ENST00000621101 ITCH-203 protein_coding Homo_sapiens 0 1269

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