C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hemicentin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142448 Hmcn2-004 ENSMUSG00000055632 10090 + 2:31446735-31460737 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142448
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142448 27.067±18.90 0.594±0.07 16.659±2.30 10.490±6.82 44.681±11.46 4.385±1.26 1.849±0.29 0.154±0.10 3.384±0.05 3.416±0.00 13.093±3.95 1.880±0.99 0.797±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000936 CIL_000936_0002 VISTA 2:31199311-31800827
CIL_0004XH CIL_0004XH_0002 CGP 2:31245823-31460738
CIL_0005UI CIL_0005UI_0002 CGP 2:31314415-31520672

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000623487 HMCN2-005 retained_intron Homo_sapiens 0 361
ENST00000624552 HMCN2-001 protein_coding Homo_sapiens 0 1748

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