C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | selenocysteine lyase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000142488  |
Scly-005 |
ENSMUSG00000026307 |
10090 | + |
1:91298368-91308743  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008D3 | CIL_0008D3_0002 | VISTA | 1:90908179-91512308 |
| CIL_0003NI | CIL_0003NI_0002 | CGP | 1:91250304-91321075 |
| CIL_0004L3 | CIL_0004L3_0003 | CGP | 1:91298338-91348306 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001887 | IMP | selenium compound metabolic process |
| GO:0003824 | IEA | catalytic activity |
| GO:0006629 | IMP | lipid metabolic process |
| GO:0030170 | IEA | pyridoxal phosphate binding |
| GO:0032868 | IMP | response to insulin |
| GO:1900408 | IMP | negative regulation of cellular response to oxidative stress |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000254663
|
SCLY-001 | protein_coding | Homo_sapiens | 0 | 514 |
|
ENST00000409736
|
SCLY-003 | protein_coding | Homo_sapiens | 0 | 514 |
|
ENST00000416757
|
SCLY-013 | protein_coding | Homo_sapiens | 0 | 329 |
|
ENST00000443532
|
SCLY-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 514 |
|
ENST00000446202
|
SCLY-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 359 |
|
ENST00000449891
|
UBE2F-SCLY-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 512 |
|
ENST00000480357
|
SCLY-002 | retained_intron | Homo_sapiens | 0 | 329 |
|
ENST00000480859
|
SCLY-015 | processed_transcript | Homo_sapiens | 0 | 346 |
|
ENST00000482031
|
SCLY-016 | retained_intron | Homo_sapiens | 0 | 508 |
