C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear transcription factor-Y beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142523 Nfyb-002 ENSMUSG00000020248 10090 - 10:82752518-82763646 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000142523
Transcript ID Liver
ENSMUST00000142523 5.911±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SA CIL_0002SA_0002 CGP 10:82696160-82764144
CIL_0004AC CIL_0004AC_0002 CGP 10:82748701-82897724

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 ISO nucleus
GO:0005667 IC transcription factor complex
GO:0043565 IEA sequence-specific DNA binding
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000240055 NFYB-001 protein_coding Homo_sapiens 0 424
ENST00000488231 RP11-457K10.2-001 processed_pseudogene Homo_sapiens 0 361
ENST00000550189 NFYB-005 retained_intron Homo_sapiens 0 394
ENST00000551446 NFYB-004 protein_coding Homo_sapiens 0 394
ENST00000551727 NFYB-003 protein_coding Homo_sapiens 0 444

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