C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002SA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111727-ENSG00000120837 CGP 9606 12:104064457-104138289
GeneTranscriptPositionBiotype
ENSG00000111727 (HCFC2)
host cell factor C2
ENST00000229330 (HCFC2-001) 104064457-104106524 protein_coding
ENST00000544223 (HCFC2-002) 104064542-104103466 nonsense_mediated_decay
ENST00000547194 (HCFC2-003) 104080433-104082756 retained_intron
ENST00000550335 (HCFC2-005) 104090923-104103301 processed_transcript
ENST00000550444 (HCFC2-004) 104064814-104079473 protein_coding
ENST00000552343 (HCFC2-006) 104098124-104103407 retained_intron
ENSG00000120837 (NFYB)
nuclear transcription factor Y, beta
ENST00000240055 (NFYB-001) 104117077-104138289 protein_coding
ENST00000550189 (NFYB-005) 104121254-104128612 retained_intron
ENST00000550881 (NFYB-002) 104131132-104138241 retained_intron
ENST00000551446 (NFYB-004) 104123264-104138203 protein_coding
ENST00000551727 (NFYB-003) 104119355-104138017 protein_coding
CIL_0002SA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020246-ENSMUSG00000020248 CGP 10090 10:82696160-82764144
GeneTranscriptPositionBiotype
ENSMUSG00000020246 (Hcfc2)
host cell factor C2
ENSMUST00000020478 (Hcfc2-001) 82699007-82742428 protein_coding
ENSMUST00000160681 (Hcfc2-002) 82728349-82741395 protein_coding
ENSMUST00000160845 (Hcfc2-003) 82696160-82709057 processed_transcript
ENSMUST00000162422 (Hcfc2-004) 82699211-82712230 nonsense_mediated_decay
ENSMUSG00000020248 (Nfyb)
nuclear transcription factor-Y beta
ENSMUST00000127832 (Nfyb-003) 82752416-82763663 processed_transcript
ENSMUST00000128397 (Nfyb-006) 82755068-82757307 retained_intron
ENSMUST00000129640 (Nfyb-005) 82751166-82752550 retained_intron
ENSMUST00000130911 (Nfyb-001) 82748701-82764144 protein_coding
ENSMUST00000142523 (Nfyb-002) 82752518-82763646 protein_coding
ENSMUST00000143749 (Nfyb-007) 82749287-82764101 retained_intron
ENSMUST00000145561 (Nfyb-004) 82750474-82751659 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SA_0001ENSG00000111727ENST00000229330ENST00000544223ENST00000547194ENST00000550335ENST00000550444ENST00000552343ENSG00000120837ENST00000240055ENST00000550189ENST00000550881ENST00000551446ENST00000551727CIL_0002SA_0002ENSMUSG00000020246ENSMUST00000020478ENSMUST00000160681ENSMUST00000160845ENSMUST00000162422ENSMUSG00000020248ENSMUST00000127832ENSMUST00000128397ENSMUST00000129640ENSMUST00000130911ENSMUST00000142523ENSMUST00000143749ENSMUST00000145561
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SA_0001ENSG00000111727ENST00000229330ENST00000544223ENST00000550444ENSG00000120837ENST00000240055ENST00000550189ENST00000551446ENST00000551727CIL_0002SA_0002ENSMUSG00000020246ENSMUST00000020478ENSMUST00000160681ENSMUST00000160845ENSMUSG00000020248ENSMUST00000127832ENSMUST00000129640ENSMUST00000130911ENSMUST00000142523ENSMUST00000143749ENSMUST00000145561
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111727 ENST00000229330 1.814±0.00 0.490±0.00 1.070±0.00 1.969±0.89 2.014±1.09 2.348±0.09 1.026±0.22 2.114±0.23 1.971±1.75 2.110±1.41 1.717±0.94 1.394±0.62 0.906±0.14 3.405±0.30
ENST00000544223 1.345±0.00 N/A 1.666±0.00 1.794±0.00 1.799±0.23 1.735±0.25 1.262±0.00 1.553±0.00 2.189±1.40 1.776±0.65 1.574±0.00 1.247±0.00 0.623±0.13 15.693±3.08
ENST00000547194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.368±0.00
ENST00000552343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000120837 ENST00000240055 2.593±0.00 N/A 0.427±0.00 4.729±0.00 1.693±0.93 4.074±2.69 1.075±0.25 3.662±0.00 1.286±0.32 0.876±0.23 1.960±0.00 3.138±0.85 1.738±0.31 4.451±1.83
ENST00000550189 N/A N/A 2.604±0.00 N/A N/A N/A N/A 3.264±0.00 N/A N/A 6.203±0.00 5.979±0.00 N/A N/A
ENST00000550881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551446 N/A N/A N/A N/A N/A 3.489±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551727 6.385±0.00 7.784±0.00 2.282±0.00 8.765±1.84 5.954±1.60 10.159±7.60 6.565±4.31 6.327±3.72 4.537±1.21 7.143±1.85 5.827±0.00 14.836±11.42 12.190±10.17 29.488±11.80
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020246 ENSMUST00000020478 2.526±0.14 2.313±1.14 4.083±1.06 7.768±0.50 4.011±0.70 1.231±0.15 2.570±0.94 1.778±0.60 1.846±1.00 1.640±0.63 2.206±0.64 2.741±1.22 5.255±0.62 11.151±4.53
ENSMUST00000160681 2.174±0.04 2.026±0.00 2.293±0.76 4.067±1.58 2.482±0.01 N/A 1.759±0.50 1.078±0.19 1.710±1.01 N/A 1.218±0.51 2.581±0.52 2.597±1.39 1.506±0.00
ENSMUST00000160845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.151±0.00 N/A 129.088±0.00
ENSMUST00000162422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020248 ENSMUST00000127832 2.593±0.00 3.358±2.38 N/A N/A 1.328±0.00 2.573±0.00 N/A 2.981±0.27 3.245±0.00 1.267±0.00 N/A 2.395±1.11 N/A N/A
ENSMUST00000128397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.213±0.00
ENSMUST00000130911 3.936±0.58 2.140±0.35 8.633±0.54 18.496±1.57 2.721±1.22 2.352±0.64 2.607±0.49 3.799±0.95 11.794±7.69 4.335±0.46 6.226±1.89 3.478±2.41 7.092±2.52 2.152±0.11
ENSMUST00000142523 N/A N/A N/A N/A N/A N/A N/A N/A 5.911±0.76 N/A N/A N/A N/A N/A
ENSMUST00000143749 0.632±0.28 N/A N/A N/A 0.660±0.26 0.712±0.14 N/A N/A 0.868±0.00 0.580±0.11 N/A 0.710±0.28 N/A 0.398±0.07
ENSMUST00000145561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.306±0.00 25.417±0.00 4.328±0.00

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