C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDGFA associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143439 Pdap1-004 ENSMUSG00000029623 10090 - 5:145131371-145135472 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000143439
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000143439 152.755±0.00 297.170±0.00 319.959±179.19 265.582±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005L5 CIL_0005L5_0003 CGP 5:145083830-145130705
CIL_0004TJ CIL_0004TJ_0002 CGP 5:145114215-145140238
CIL_0005LD CIL_0005LD_0003 CGP 5:145128769-145148078

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350498 PDAP1-001 protein_coding Homo_sapiens 0 475
ENST00000426447 PDAP1-002 nonsense_mediated_decay Homo_sapiens 0 512

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