C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin IX
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144003 Syt9-004 ENSMUSG00000062542 10090 + 7:107504062-107548653 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleOvaryPlacentaTestisENSMUST00000144003
Transcript ID Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000144003 0.094±0.03 0.039±0.00 0.199±0.00 0.144±0.00 0.145±0.06 0.410±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HA CIL_0007HA_0002 CGP 7:107209445-107548656
CIL_0001FU CIL_0001FU_0003 CGP 7:107370728-107591094

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318881 SYT9-001 protein_coding Homo_sapiens 0 630
ENST00000524820 SYT9-003 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000532592 SYT9-002 nonsense_mediated_decay Homo_sapiens 0 630

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